Gene : Potri.005G251800 P. trichocarpa v3.0
Defline:  (1 of 3) K12385 - Niemann-Pick C1 protein (NPC1) Genomic Order:  2518
Name:  ? Potri.005G251800 Secondary Identifier:  ? PAC:27028349
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G251800 0.5kb upstream 0.5kb upstream 13682 true Chr05: 25378641-25392322 Populus trichocarpa
Potri.005G251800 0.5kb upstream 0.5kb upstream 500 false Chr05: 25391823-25392322 Populus trichocarpa
Potri.005G251800 0.5kb downstream 0.5kb downstream 13682 true Chr05: 25378141-25391822 Populus trichocarpa
Potri.005G251800 0.5kb downstream 0.5kb downstream 500 false Chr05: 25378141-25378640 Populus trichocarpa
Potri.005G251800 1.0kb upstream 1.0kb upstream 14182 true Chr05: 25378641-25392822 Populus trichocarpa
Potri.005G251800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 25391823-25392822 Populus trichocarpa
Potri.005G251800 1.0kb downstream 1.0kb downstream 14182 true Chr05: 25377641-25391822 Populus trichocarpa
Potri.005G251800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 25377641-25378640 Populus trichocarpa
Potri.005G251800 2.0kb upstream 2.0kb upstream 15182 true Chr05: 25378641-25393822 Populus trichocarpa
Potri.005G251800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 25391823-25393822 Populus trichocarpa
Potri.005G251800 2.0kb downstream 2.0kb downstream 15182 true Chr05: 25376641-25391822 Populus trichocarpa
Potri.005G251800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 25376641-25378640 Populus trichocarpa
Potri.005G251800 5.0kb upstream 5.0kb upstream 18182 true Chr05: 25378641-25396822 Populus trichocarpa
Potri.005G251800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 25391823-25396822 Populus trichocarpa
Potri.005G251800 5.0kb downstream 5.0kb downstream 18182 true Chr05: 25373641-25391822 Populus trichocarpa
Potri.005G251800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 25373641-25378640 Populus trichocarpa
Potri.005G251800 10.0kb upstream 10.0kb upstream 23182 true Chr05: 25378641-25401822 Populus trichocarpa
Potri.005G251800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 25391823-25401822 Populus trichocarpa
Potri.005G251800 10.0kb downstream 10.0kb downstream 23182 true Chr05: 25368641-25391822 Populus trichocarpa
Potri.005G251800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 25368641-25378640 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.136        
cufflinks 0.42        
cufflinks 1.734       High
cufflinks 0.308        
cufflinks 2.099       High
cufflinks 0.221       Low
cufflinks 0.16       Low
cufflinks 0.148     Low Low
cufflinks 1.932       High
cufflinks 0.289        
cufflinks 0.46        
cufflinks 0.217       Low
cufflinks 1.024        
cufflinks 0.697        
cufflinks 0.957        
cufflinks 2.289       High
cufflinks 0.254        
cufflinks 0.816        
cufflinks 0.134     Low Low
cufflinks 0.459        
cufflinks 0.205       Low
cufflinks 0.996        
cufflinks 1.997       High
cufflinks 0.648        
cufflinks 1.969       Low
cufflinks 14.029       High
cufflinks 13.593       High
cufflinks 3.135        
cufflinks 3.812        
cufflinks 8.118        

0 Strain