Gene : Potri.005G229400 P. trichocarpa v3.0
Defline:  (1 of 1) K00611 - ornithine carbamoyltransferase (OTC, argF, argI) Genomic Order:  2294
Name:  ? Potri.005G229400 Secondary Identifier:  ? PAC:27028787
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ARGSYNBSUB-PWY Populus trichocarpa pathologic  
Ptrichocarpa CITRULLINE-DEG-PWY Populus trichocarpa pathologic  
Ptrichocarpa CITRULBIO-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-4984 Populus trichocarpa pathologic  
Ptrichocarpa ARGSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G229400 0.5kb upstream 0.5kb upstream 3890 true Chr05: 23836127-23840016 Populus trichocarpa
Potri.005G229400 0.5kb upstream 0.5kb upstream 500 false Chr05: 23839517-23840016 Populus trichocarpa
Potri.005G229400 0.5kb downstream 0.5kb downstream 3890 true Chr05: 23835627-23839516 Populus trichocarpa
Potri.005G229400 0.5kb downstream 0.5kb downstream 500 false Chr05: 23835627-23836126 Populus trichocarpa
Potri.005G229400 1.0kb upstream 1.0kb upstream 4390 true Chr05: 23836127-23840516 Populus trichocarpa
Potri.005G229400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 23839517-23840516 Populus trichocarpa
Potri.005G229400 1.0kb downstream 1.0kb downstream 4390 true Chr05: 23835127-23839516 Populus trichocarpa
Potri.005G229400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 23835127-23836126 Populus trichocarpa
Potri.005G229400 2.0kb upstream 2.0kb upstream 5390 true Chr05: 23836127-23841516 Populus trichocarpa
Potri.005G229400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 23839517-23841516 Populus trichocarpa
Potri.005G229400 2.0kb downstream 2.0kb downstream 5390 true Chr05: 23834127-23839516 Populus trichocarpa
Potri.005G229400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 23834127-23836126 Populus trichocarpa
Potri.005G229400 5.0kb upstream 5.0kb upstream 8390 true Chr05: 23836127-23844516 Populus trichocarpa
Potri.005G229400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 23839517-23844516 Populus trichocarpa
Potri.005G229400 5.0kb downstream 5.0kb downstream 8390 true Chr05: 23831127-23839516 Populus trichocarpa
Potri.005G229400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 23831127-23836126 Populus trichocarpa
Potri.005G229400 10.0kb upstream 10.0kb upstream 13390 true Chr05: 23836127-23849516 Populus trichocarpa
Potri.005G229400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 23839517-23849516 Populus trichocarpa
Potri.005G229400 10.0kb downstream 10.0kb downstream 13390 true Chr05: 23826127-23839516 Populus trichocarpa
Potri.005G229400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 23826127-23836126 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.177        
cufflinks 4.94        
cufflinks 4.734        
cufflinks 4.843        
cufflinks 7.1        
cufflinks 7.513        
cufflinks 6.828        
cufflinks 1.803       Low
cufflinks 4.542        
cufflinks 4.648        
cufflinks 7.957        
cufflinks 5.905        
cufflinks 7.07        
cufflinks 7.703        
cufflinks 7.548        
cufflinks 4.508        
cufflinks 12.503     High High
cufflinks 4.421        
cufflinks 6.429        
cufflinks 4.064        
cufflinks 4.114        
cufflinks 7.808        
cufflinks 8.073        
cufflinks 4.886        
cufflinks 15.062        
cufflinks 12.27        
cufflinks 11.563        
cufflinks 17.808        
cufflinks 20.441        
cufflinks 14.068        

0 Strain