Gene : Potri.005G224900 P. trichocarpa v3.0
Defline:  (1 of 1) K06636 - structural maintenance of chromosome 1 (SMC1) Genomic Order:  2249
Name:  ? Potri.005G224900 Secondary Identifier:  ? PAC:27031789
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G224900 0.5kb upstream 0.5kb upstream 14493 true Chr05: 23501412-23515904 Populus trichocarpa
Potri.005G224900 0.5kb upstream 0.5kb upstream 500 false Chr05: 23515405-23515904 Populus trichocarpa
Potri.005G224900 0.5kb downstream 0.5kb downstream 14493 true Chr05: 23500912-23515404 Populus trichocarpa
Potri.005G224900 0.5kb downstream 0.5kb downstream 500 false Chr05: 23500912-23501411 Populus trichocarpa
Potri.005G224900 1.0kb upstream 1.0kb upstream 14993 true Chr05: 23501412-23516404 Populus trichocarpa
Potri.005G224900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 23515405-23516404 Populus trichocarpa
Potri.005G224900 1.0kb downstream 1.0kb downstream 14993 true Chr05: 23500412-23515404 Populus trichocarpa
Potri.005G224900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 23500412-23501411 Populus trichocarpa
Potri.005G224900 2.0kb upstream 2.0kb upstream 15993 true Chr05: 23501412-23517404 Populus trichocarpa
Potri.005G224900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 23515405-23517404 Populus trichocarpa
Potri.005G224900 2.0kb downstream 2.0kb downstream 15993 true Chr05: 23499412-23515404 Populus trichocarpa
Potri.005G224900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 23499412-23501411 Populus trichocarpa
Potri.005G224900 5.0kb upstream 5.0kb upstream 18993 true Chr05: 23501412-23520404 Populus trichocarpa
Potri.005G224900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 23515405-23520404 Populus trichocarpa
Potri.005G224900 5.0kb downstream 5.0kb downstream 18993 true Chr05: 23496412-23515404 Populus trichocarpa
Potri.005G224900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 23496412-23501411 Populus trichocarpa
Potri.005G224900 10.0kb upstream 10.0kb upstream 23993 true Chr05: 23501412-23525404 Populus trichocarpa
Potri.005G224900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 23515405-23525404 Populus trichocarpa
Potri.005G224900 10.0kb downstream 10.0kb downstream 23993 true Chr05: 23491412-23515404 Populus trichocarpa
Potri.005G224900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 23491412-23501411 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.08        
cufflinks 2.177        
cufflinks 4.362       High
cufflinks 4.719       High
cufflinks 4.733       High
cufflinks 1.227       Low
cufflinks 2.589        
cufflinks 2.058        
cufflinks 2.393        
cufflinks 1.717       Low
cufflinks 2.656        
cufflinks 1.591       Low
cufflinks 2.319        
cufflinks 2.673        
cufflinks 2.958        
cufflinks 2.122        
cufflinks 1.774        
cufflinks 2.686        
cufflinks 2.511        
cufflinks 1.681       Low
cufflinks 3.358        
cufflinks 1.983        
cufflinks 3.974       High
cufflinks 1.897        
cufflinks 29.113     High  
cufflinks 31.347     High  
cufflinks 31.018     High  
cufflinks 36.365     High High
cufflinks 27.539        
cufflinks 28.675     High  

0 Strain