Gene : Potri.006G040600 P. trichocarpa v3.0
Defline:  (1 of 2) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Genomic Order:  406
Name:  ? Potri.006G040600 Secondary Identifier:  ? PAC:27005353
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G040600 0.5kb upstream 0.5kb upstream 3350 true Chr06: 2893063-2896412 Populus trichocarpa
Potri.006G040600 0.5kb upstream 0.5kb upstream 500 false Chr06: 2893063-2893562 Populus trichocarpa
Potri.006G040600 0.5kb downstream 0.5kb downstream 3350 true Chr06: 2893563-2896912 Populus trichocarpa
Potri.006G040600 0.5kb downstream 0.5kb downstream 500 false Chr06: 2896413-2896912 Populus trichocarpa
Potri.006G040600 1.0kb upstream 1.0kb upstream 3850 true Chr06: 2892563-2896412 Populus trichocarpa
Potri.006G040600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2892563-2893562 Populus trichocarpa
Potri.006G040600 1.0kb downstream 1.0kb downstream 3850 true Chr06: 2893563-2897412 Populus trichocarpa
Potri.006G040600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2896413-2897412 Populus trichocarpa
Potri.006G040600 2.0kb upstream 2.0kb upstream 4850 true Chr06: 2891563-2896412 Populus trichocarpa
Potri.006G040600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2891563-2893562 Populus trichocarpa
Potri.006G040600 2.0kb downstream 2.0kb downstream 4850 true Chr06: 2893563-2898412 Populus trichocarpa
Potri.006G040600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2896413-2898412 Populus trichocarpa
Potri.006G040600 5.0kb upstream 5.0kb upstream 7850 true Chr06: 2888563-2896412 Populus trichocarpa
Potri.006G040600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2888563-2893562 Populus trichocarpa
Potri.006G040600 5.0kb downstream 5.0kb downstream 7850 true Chr06: 2893563-2901412 Populus trichocarpa
Potri.006G040600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2896413-2901412 Populus trichocarpa
Potri.006G040600 10.0kb upstream 10.0kb upstream 12850 true Chr06: 2883563-2896412 Populus trichocarpa
Potri.006G040600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2883563-2893562 Populus trichocarpa
Potri.006G040600 10.0kb downstream 10.0kb downstream 12850 true Chr06: 2893563-2906412 Populus trichocarpa
Potri.006G040600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2896413-2906412 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.874        
cufflinks 3.416        
cufflinks 2.036        
cufflinks 9.163     High High
cufflinks 2.916        
cufflinks 1.461       Low
cufflinks 1.915        
cufflinks 1.823       Low
cufflinks 4.837       High
cufflinks 2.93        
cufflinks 4.999       High
cufflinks 3.911        
cufflinks 2.685        
cufflinks 1.489       Low
cufflinks 1.641       Low
cufflinks 3.032        
cufflinks 2.68        
cufflinks 1.907        
cufflinks 4.315        
cufflinks 4.504        
cufflinks 4.221        
cufflinks 2.726        
cufflinks 3.133        
cufflinks 2.942        
cufflinks 3.787        
cufflinks 11.223        
cufflinks 10.638        
cufflinks 22.444       High
cufflinks 24.674       High
cufflinks 12.47        

0 Strain