Gene : Potri.006G157000 P. trichocarpa v3.0
Defline:  (1 of 4) K08490 - syntaxin 5 (STX5) Genomic Order:  1570
Name:  ? Potri.006G157000 Secondary Identifier:  ? PAC:27004974
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G157000 0.5kb upstream 0.5kb upstream 5341 true Chr06: 14540650-14545990 Populus trichocarpa
Potri.006G157000 0.5kb upstream 0.5kb upstream 500 false Chr06: 14540650-14541149 Populus trichocarpa
Potri.006G157000 0.5kb downstream 0.5kb downstream 5341 true Chr06: 14541150-14546490 Populus trichocarpa
Potri.006G157000 0.5kb downstream 0.5kb downstream 500 false Chr06: 14545991-14546490 Populus trichocarpa
Potri.006G157000 1.0kb upstream 1.0kb upstream 5841 true Chr06: 14540150-14545990 Populus trichocarpa
Potri.006G157000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14540150-14541149 Populus trichocarpa
Potri.006G157000 1.0kb downstream 1.0kb downstream 5841 true Chr06: 14541150-14546990 Populus trichocarpa
Potri.006G157000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14545991-14546990 Populus trichocarpa
Potri.006G157000 2.0kb upstream 2.0kb upstream 6841 true Chr06: 14539150-14545990 Populus trichocarpa
Potri.006G157000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14539150-14541149 Populus trichocarpa
Potri.006G157000 2.0kb downstream 2.0kb downstream 6841 true Chr06: 14541150-14547990 Populus trichocarpa
Potri.006G157000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14545991-14547990 Populus trichocarpa
Potri.006G157000 5.0kb upstream 5.0kb upstream 9841 true Chr06: 14536150-14545990 Populus trichocarpa
Potri.006G157000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14536150-14541149 Populus trichocarpa
Potri.006G157000 5.0kb downstream 5.0kb downstream 9841 true Chr06: 14541150-14550990 Populus trichocarpa
Potri.006G157000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14545991-14550990 Populus trichocarpa
Potri.006G157000 10.0kb upstream 10.0kb upstream 14841 true Chr06: 14531150-14545990 Populus trichocarpa
Potri.006G157000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14531150-14541149 Populus trichocarpa
Potri.006G157000 10.0kb downstream 10.0kb downstream 14841 true Chr06: 14541150-14555990 Populus trichocarpa
Potri.006G157000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14545991-14555990 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.219        
cufflinks 0.244        
cufflinks 0.183        
cufflinks 0.224        
cufflinks 0.171        
cufflinks 0.169     Low  
cufflinks 0.306       High
cufflinks 0.18        
cufflinks 0.262        
cufflinks 0.246        
cufflinks 0.217        
cufflinks 0.103     Low Low
cufflinks 0.215        
cufflinks 0.107     Low Low
cufflinks 0.155     Low  
cufflinks 0.259        
cufflinks 0.213        
cufflinks 0.114     Low Low
cufflinks 0.284       High
cufflinks 0.309       High
cufflinks 0.17     Low  
cufflinks 0.218        
cufflinks 0.264        
cufflinks 0.319       High
cufflinks 2.316        
cufflinks 2.11       Low
cufflinks 2.956       High
cufflinks 2.252        
cufflinks 2.338        
cufflinks 2.661        

0 Strain