Gene : Potri.006G124400 P. trichocarpa v3.0
Defline:  (1 of 2) K01892 - histidyl-tRNA synthetase (HARS, hisS) Genomic Order:  1244
Name:  ? Potri.006G124400 Secondary Identifier:  ? PAC:27004257
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G124400 0.5kb upstream 0.5kb upstream 6998 true Chr06: 9984586-9991583 Populus trichocarpa
Potri.006G124400 0.5kb upstream 0.5kb upstream 500 false Chr06: 9991084-9991583 Populus trichocarpa
Potri.006G124400 0.5kb downstream 0.5kb downstream 6998 true Chr06: 9984086-9991083 Populus trichocarpa
Potri.006G124400 0.5kb downstream 0.5kb downstream 500 false Chr06: 9984086-9984585 Populus trichocarpa
Potri.006G124400 1.0kb upstream 1.0kb upstream 7498 true Chr06: 9984586-9992083 Populus trichocarpa
Potri.006G124400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9991084-9992083 Populus trichocarpa
Potri.006G124400 1.0kb downstream 1.0kb downstream 7498 true Chr06: 9983586-9991083 Populus trichocarpa
Potri.006G124400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9983586-9984585 Populus trichocarpa
Potri.006G124400 2.0kb upstream 2.0kb upstream 8498 true Chr06: 9984586-9993083 Populus trichocarpa
Potri.006G124400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9991084-9993083 Populus trichocarpa
Potri.006G124400 2.0kb downstream 2.0kb downstream 8498 true Chr06: 9982586-9991083 Populus trichocarpa
Potri.006G124400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9982586-9984585 Populus trichocarpa
Potri.006G124400 5.0kb upstream 5.0kb upstream 11498 true Chr06: 9984586-9996083 Populus trichocarpa
Potri.006G124400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9991084-9996083 Populus trichocarpa
Potri.006G124400 5.0kb downstream 5.0kb downstream 11498 true Chr06: 9979586-9991083 Populus trichocarpa
Potri.006G124400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9979586-9984585 Populus trichocarpa
Potri.006G124400 10.0kb upstream 10.0kb upstream 16498 true Chr06: 9984586-10001083 Populus trichocarpa
Potri.006G124400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9991084-10001083 Populus trichocarpa
Potri.006G124400 10.0kb downstream 10.0kb downstream 16498 true Chr06: 9974586-9991083 Populus trichocarpa
Potri.006G124400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9974586-9984585 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.768        
cufflinks 2.685       High
cufflinks 0.818       Low
cufflinks 2.445       High
cufflinks 0.815       Low
cufflinks 1.119        
cufflinks 0.965        
cufflinks 1.652        
cufflinks 1.481        
cufflinks 0.887        
cufflinks 0.589       Low
cufflinks 2.04       High
cufflinks 2.242       High
cufflinks 1.091        
cufflinks 1.47        
cufflinks 0.581       Low
cufflinks 0.92        
cufflinks 2.039       High
cufflinks 1.05        
cufflinks 1.712        
cufflinks 1.684        
cufflinks 1.356        
cufflinks 1.635        
cufflinks 1.101        
cufflinks 6.884        
cufflinks 6.666        
cufflinks 6.831        
cufflinks 7.008        
cufflinks 6.992        
cufflinks 6.315        

0 Strain