Gene : Potri.006G158500 P. trichocarpa v3.0
Defline:  (1 of 4) K08490 - syntaxin 5 (STX5) Genomic Order:  1585
Name:  ? Potri.006G158500 Secondary Identifier:  ? PAC:27007442
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G158500 0.5kb upstream 0.5kb upstream 5003 true Chr06: 14877812-14882814 Populus trichocarpa
Potri.006G158500 0.5kb upstream 0.5kb upstream 500 false Chr06: 14882315-14882814 Populus trichocarpa
Potri.006G158500 0.5kb downstream 0.5kb downstream 5003 true Chr06: 14877312-14882314 Populus trichocarpa
Potri.006G158500 0.5kb downstream 0.5kb downstream 500 false Chr06: 14877312-14877811 Populus trichocarpa
Potri.006G158500 1.0kb upstream 1.0kb upstream 5503 true Chr06: 14877812-14883314 Populus trichocarpa
Potri.006G158500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14882315-14883314 Populus trichocarpa
Potri.006G158500 1.0kb downstream 1.0kb downstream 5503 true Chr06: 14876812-14882314 Populus trichocarpa
Potri.006G158500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14876812-14877811 Populus trichocarpa
Potri.006G158500 2.0kb upstream 2.0kb upstream 6503 true Chr06: 14877812-14884314 Populus trichocarpa
Potri.006G158500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14882315-14884314 Populus trichocarpa
Potri.006G158500 2.0kb downstream 2.0kb downstream 6503 true Chr06: 14875812-14882314 Populus trichocarpa
Potri.006G158500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14875812-14877811 Populus trichocarpa
Potri.006G158500 5.0kb upstream 5.0kb upstream 9503 true Chr06: 14877812-14887314 Populus trichocarpa
Potri.006G158500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14882315-14887314 Populus trichocarpa
Potri.006G158500 5.0kb downstream 5.0kb downstream 9503 true Chr06: 14872812-14882314 Populus trichocarpa
Potri.006G158500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14872812-14877811 Populus trichocarpa
Potri.006G158500 10.0kb upstream 10.0kb upstream 14503 true Chr06: 14877812-14892314 Populus trichocarpa
Potri.006G158500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14882315-14892314 Populus trichocarpa
Potri.006G158500 10.0kb downstream 10.0kb downstream 14503 true Chr06: 14867812-14882314 Populus trichocarpa
Potri.006G158500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14867812-14877811 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.591       High
cufflinks 0.454        
cufflinks 0.208       Low
cufflinks 0.239       Low
cufflinks 0.448        
cufflinks 0.386        
cufflinks 0.303        
cufflinks 0.489       High
cufflinks 0.173       Low
cufflinks 0.351        
cufflinks 0.371        
cufflinks 0.362        
cufflinks 0.339        
cufflinks 0.257       Low
cufflinks 0.391        
cufflinks 0.273        
cufflinks 0.29        
cufflinks 0.579       High
cufflinks 0.48        
cufflinks 0.333        
cufflinks 0.403        
cufflinks 0.488       High
cufflinks 0.419        
cufflinks 0.263        
cufflinks 1.453        
cufflinks 1.265        
cufflinks 2.214       High
cufflinks 2.456       High
cufflinks 2.51       High
cufflinks 1.946        

0 Strain