Gene : Potri.006G078200 P. trichocarpa v3.0
Defline:  (1 of 2) K01961 - acetyl-CoA carboxylase, biotin carboxylase subunit (accC) Genomic Order:  782
Name:  ? Potri.006G078200 Secondary Identifier:  ? PAC:27007174
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7388 Populus trichocarpa pathologic  
Ptrichocarpa PWY0-1264 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4381 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5156 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G078200 0.5kb upstream 0.5kb upstream 9948 true Chr06: 5916906-5926853 Populus trichocarpa
Potri.006G078200 0.5kb upstream 0.5kb upstream 500 false Chr06: 5916906-5917405 Populus trichocarpa
Potri.006G078200 0.5kb downstream 0.5kb downstream 9948 true Chr06: 5917406-5927353 Populus trichocarpa
Potri.006G078200 0.5kb downstream 0.5kb downstream 500 false Chr06: 5926854-5927353 Populus trichocarpa
Potri.006G078200 1.0kb upstream 1.0kb upstream 10448 true Chr06: 5916406-5926853 Populus trichocarpa
Potri.006G078200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5916406-5917405 Populus trichocarpa
Potri.006G078200 1.0kb downstream 1.0kb downstream 10448 true Chr06: 5917406-5927853 Populus trichocarpa
Potri.006G078200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5926854-5927853 Populus trichocarpa
Potri.006G078200 2.0kb upstream 2.0kb upstream 11448 true Chr06: 5915406-5926853 Populus trichocarpa
Potri.006G078200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5915406-5917405 Populus trichocarpa
Potri.006G078200 2.0kb downstream 2.0kb downstream 11448 true Chr06: 5917406-5928853 Populus trichocarpa
Potri.006G078200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5926854-5928853 Populus trichocarpa
Potri.006G078200 5.0kb upstream 5.0kb upstream 14448 true Chr06: 5912406-5926853 Populus trichocarpa
Potri.006G078200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5912406-5917405 Populus trichocarpa
Potri.006G078200 5.0kb downstream 5.0kb downstream 14448 true Chr06: 5917406-5931853 Populus trichocarpa
Potri.006G078200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5926854-5931853 Populus trichocarpa
Potri.006G078200 10.0kb upstream 10.0kb upstream 19448 true Chr06: 5907406-5926853 Populus trichocarpa
Potri.006G078200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5907406-5917405 Populus trichocarpa
Potri.006G078200 10.0kb downstream 10.0kb downstream 19448 true Chr06: 5917406-5936853 Populus trichocarpa
Potri.006G078200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5926854-5936853 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.948        
cufflinks 3.288       High
cufflinks 2.228        
cufflinks 1.418        
cufflinks 1.329        
cufflinks 2.054        
cufflinks 1.448        
cufflinks 1.481        
cufflinks 1.474        
cufflinks 2.427        
cufflinks 1.764        
cufflinks 1.55        
cufflinks 2.707        
cufflinks 3.162       High
cufflinks 3.105       High
cufflinks 1.376        
cufflinks 1.153       Low
cufflinks 0.813       Low
cufflinks 1.561        
cufflinks 1.58        
cufflinks 2.304        
cufflinks 2.606        
cufflinks 3.119       High
cufflinks 2.491        
cufflinks 2.372        
cufflinks 5.636        
cufflinks 10.278        
cufflinks 8.253        
cufflinks 14.3       High
cufflinks 5.428        

0 Strain