Gene : Potri.006G228100 P. trichocarpa v3.0
Defline:  (1 of 2) KOG3239 - Density-regulated protein related to translation initiation factor 1 (eIF-1/SUI1) Genomic Order:  2281
Name:  ? Potri.006G228100 Secondary Identifier:  ? PAC:27006606
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G228100 0.5kb upstream 0.5kb upstream 3656 true Chr06: 23921447-23925102 Populus trichocarpa
Potri.006G228100 0.5kb upstream 0.5kb upstream 500 false Chr06: 23924603-23925102 Populus trichocarpa
Potri.006G228100 0.5kb downstream 0.5kb downstream 3656 true Chr06: 23920947-23924602 Populus trichocarpa
Potri.006G228100 0.5kb downstream 0.5kb downstream 500 false Chr06: 23920947-23921446 Populus trichocarpa
Potri.006G228100 1.0kb upstream 1.0kb upstream 4156 true Chr06: 23921447-23925602 Populus trichocarpa
Potri.006G228100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23924603-23925602 Populus trichocarpa
Potri.006G228100 1.0kb downstream 1.0kb downstream 4156 true Chr06: 23920447-23924602 Populus trichocarpa
Potri.006G228100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23920447-23921446 Populus trichocarpa
Potri.006G228100 2.0kb upstream 2.0kb upstream 5156 true Chr06: 23921447-23926602 Populus trichocarpa
Potri.006G228100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23924603-23926602 Populus trichocarpa
Potri.006G228100 2.0kb downstream 2.0kb downstream 5156 true Chr06: 23919447-23924602 Populus trichocarpa
Potri.006G228100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23919447-23921446 Populus trichocarpa
Potri.006G228100 5.0kb upstream 5.0kb upstream 8156 true Chr06: 23921447-23929602 Populus trichocarpa
Potri.006G228100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23924603-23929602 Populus trichocarpa
Potri.006G228100 5.0kb downstream 5.0kb downstream 8156 true Chr06: 23916447-23924602 Populus trichocarpa
Potri.006G228100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23916447-23921446 Populus trichocarpa
Potri.006G228100 10.0kb upstream 10.0kb upstream 13156 true Chr06: 23921447-23934602 Populus trichocarpa
Potri.006G228100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23924603-23934602 Populus trichocarpa
Potri.006G228100 10.0kb downstream 10.0kb downstream 13156 true Chr06: 23911447-23924602 Populus trichocarpa
Potri.006G228100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23911447-23921446 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.96       Low
cufflinks 1.721       Low
cufflinks 2.466        
cufflinks 2.77        
cufflinks 2.938        
cufflinks 2.483        
cufflinks 2.004       Low
cufflinks 3.71       High
cufflinks 3.315       High
cufflinks 2.178        
cufflinks 3.35       High
cufflinks 2.007       Low
cufflinks 3.172        
cufflinks 2.878        
cufflinks 2.289        
cufflinks 1.751       Low
cufflinks 2.281        
cufflinks 3.938       High
cufflinks 2.131        
cufflinks 2.419        
cufflinks 2.037        
cufflinks 3.641       High
cufflinks 2.674        
cufflinks 2.915        
cufflinks 26.051        
cufflinks 19.611       Low
cufflinks 21.911        
cufflinks 19.537       Low
cufflinks 29.114     High High
cufflinks 20.498        

0 Strain