Gene : Potri.006G134300 P. trichocarpa v3.0
Defline:  (1 of 1) K14157 - alpha-aminoadipic semialdehyde synthase (AASS) Genomic Order:  1343
Name:  ? Potri.006G134300 Secondary Identifier:  ? PAC:27008615
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa LYSINE-DEG1-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G134300 0.5kb upstream 0.5kb upstream 13020 true Chr06: 11058268-11071287 Populus trichocarpa
Potri.006G134300 0.5kb upstream 0.5kb upstream 500 false Chr06: 11070788-11071287 Populus trichocarpa
Potri.006G134300 0.5kb downstream 0.5kb downstream 13020 true Chr06: 11057768-11070787 Populus trichocarpa
Potri.006G134300 0.5kb downstream 0.5kb downstream 500 false Chr06: 11057768-11058267 Populus trichocarpa
Potri.006G134300 1.0kb upstream 1.0kb upstream 13520 true Chr06: 11058268-11071787 Populus trichocarpa
Potri.006G134300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11070788-11071787 Populus trichocarpa
Potri.006G134300 1.0kb downstream 1.0kb downstream 13520 true Chr06: 11057268-11070787 Populus trichocarpa
Potri.006G134300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11057268-11058267 Populus trichocarpa
Potri.006G134300 2.0kb upstream 2.0kb upstream 14520 true Chr06: 11058268-11072787 Populus trichocarpa
Potri.006G134300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11070788-11072787 Populus trichocarpa
Potri.006G134300 2.0kb downstream 2.0kb downstream 14520 true Chr06: 11056268-11070787 Populus trichocarpa
Potri.006G134300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11056268-11058267 Populus trichocarpa
Potri.006G134300 5.0kb upstream 5.0kb upstream 17520 true Chr06: 11058268-11075787 Populus trichocarpa
Potri.006G134300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11070788-11075787 Populus trichocarpa
Potri.006G134300 5.0kb downstream 5.0kb downstream 17520 true Chr06: 11053268-11070787 Populus trichocarpa
Potri.006G134300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11053268-11058267 Populus trichocarpa
Potri.006G134300 10.0kb upstream 10.0kb upstream 22520 true Chr06: 11058268-11080787 Populus trichocarpa
Potri.006G134300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11070788-11080787 Populus trichocarpa
Potri.006G134300 10.0kb downstream 10.0kb downstream 22520 true Chr06: 11048268-11070787 Populus trichocarpa
Potri.006G134300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11048268-11058267 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.34        
cufflinks 1.881       High
cufflinks 0.488        
cufflinks 2.723       High
cufflinks 0.285        
cufflinks 0.181       Low
cufflinks 0.338        
cufflinks 2.777       High
cufflinks 2.702       High
cufflinks 0.235       Low
cufflinks 0.259        
cufflinks 0.557        
cufflinks 3.379       High
cufflinks 2.241       High
cufflinks 0.119     Low Low
cufflinks 0.641        
cufflinks 0.824        
cufflinks 0.318        
cufflinks 0.467        
cufflinks 0.519        
cufflinks 2.194       High
cufflinks 0.598        
cufflinks 0.259        
cufflinks 0.659        
cufflinks 21.448        
cufflinks 25.709        
cufflinks 19.4        
cufflinks 14.254        
cufflinks 9.841        
cufflinks 29.31     High  

0 Strain