Gene : Potri.006G278500 P. trichocarpa v3.0
Defline:  (1 of 1) 2.1.1.177 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase / rRNA large subunit methyltransferase H Genomic Order:  2785
Name:  ? Potri.006G278500 Secondary Identifier:  ? PAC:27008495
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G278500 0.5kb upstream 0.5kb upstream 2921 true Chr06: 27729859-27732779 Populus trichocarpa
Potri.006G278500 0.5kb upstream 0.5kb upstream 500 false Chr06: 27732280-27732779 Populus trichocarpa
Potri.006G278500 0.5kb downstream 0.5kb downstream 2921 true Chr06: 27729359-27732279 Populus trichocarpa
Potri.006G278500 0.5kb downstream 0.5kb downstream 500 false Chr06: 27729359-27729858 Populus trichocarpa
Potri.006G278500 1.0kb upstream 1.0kb upstream 3421 true Chr06: 27729859-27733279 Populus trichocarpa
Potri.006G278500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27732280-27733279 Populus trichocarpa
Potri.006G278500 1.0kb downstream 1.0kb downstream 3421 true Chr06: 27728859-27732279 Populus trichocarpa
Potri.006G278500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27728859-27729858 Populus trichocarpa
Potri.006G278500 2.0kb upstream 2.0kb upstream 4421 true Chr06: 27729859-27734279 Populus trichocarpa
Potri.006G278500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27732280-27734279 Populus trichocarpa
Potri.006G278500 2.0kb downstream 2.0kb downstream 4421 true Chr06: 27727859-27732279 Populus trichocarpa
Potri.006G278500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27727859-27729858 Populus trichocarpa
Potri.006G278500 5.0kb upstream 5.0kb upstream 7421 true Chr06: 27729859-27737279 Populus trichocarpa
Potri.006G278500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27732280-27737279 Populus trichocarpa
Potri.006G278500 5.0kb downstream 5.0kb downstream 7421 true Chr06: 27724859-27732279 Populus trichocarpa
Potri.006G278500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27724859-27729858 Populus trichocarpa
Potri.006G278500 10.0kb upstream 10.0kb upstream 12421 true Chr06: 27729859-27742279 Populus trichocarpa
Potri.006G278500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27732280-27742279 Populus trichocarpa
Potri.006G278500 10.0kb downstream 10.0kb downstream 12421 true Chr06: 27719859-27732279 Populus trichocarpa
Potri.006G278500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27719859-27729858 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.317       Low
cufflinks 0.677        
cufflinks 1.24       High
cufflinks 0.931        
cufflinks 3.441       High
cufflinks 0.519        
cufflinks 0.212       Low
cufflinks 0.436        
cufflinks 0.75        
cufflinks 0.382        
cufflinks 0.556        
cufflinks 0.361        
cufflinks 0.71        
cufflinks 0.544        
cufflinks 0.538        
cufflinks 0.217       Low
cufflinks 0.399        
cufflinks 0.951        
cufflinks 0.523        
cufflinks 0.707        
cufflinks 0.48        
cufflinks 0.781        
cufflinks 0.64        
cufflinks 0.466        
cufflinks 6.112        
cufflinks 4.539        
cufflinks 6.853        
cufflinks 6.298        
cufflinks 8.215       High
cufflinks 4.664        

0 Strain