Gene : Potri.006G053300 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR15664//PTHR15664:SF3 - C20ORF30 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  533
Name:  ? Potri.006G053300 Secondary Identifier:  ? PAC:27008125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G053300 0.5kb upstream 0.5kb upstream 4076 true Chr06: 3854446-3858521 Populus trichocarpa
Potri.006G053300 0.5kb upstream 0.5kb upstream 500 false Chr06: 3854446-3854945 Populus trichocarpa
Potri.006G053300 0.5kb downstream 0.5kb downstream 4076 true Chr06: 3854946-3859021 Populus trichocarpa
Potri.006G053300 0.5kb downstream 0.5kb downstream 500 false Chr06: 3858522-3859021 Populus trichocarpa
Potri.006G053300 1.0kb upstream 1.0kb upstream 4576 true Chr06: 3853946-3858521 Populus trichocarpa
Potri.006G053300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3853946-3854945 Populus trichocarpa
Potri.006G053300 1.0kb downstream 1.0kb downstream 4576 true Chr06: 3854946-3859521 Populus trichocarpa
Potri.006G053300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3858522-3859521 Populus trichocarpa
Potri.006G053300 2.0kb upstream 2.0kb upstream 5576 true Chr06: 3852946-3858521 Populus trichocarpa
Potri.006G053300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3852946-3854945 Populus trichocarpa
Potri.006G053300 2.0kb downstream 2.0kb downstream 5576 true Chr06: 3854946-3860521 Populus trichocarpa
Potri.006G053300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3858522-3860521 Populus trichocarpa
Potri.006G053300 5.0kb upstream 5.0kb upstream 8576 true Chr06: 3849946-3858521 Populus trichocarpa
Potri.006G053300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3849946-3854945 Populus trichocarpa
Potri.006G053300 5.0kb downstream 5.0kb downstream 8576 true Chr06: 3854946-3863521 Populus trichocarpa
Potri.006G053300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3858522-3863521 Populus trichocarpa
Potri.006G053300 10.0kb upstream 10.0kb upstream 13576 true Chr06: 3844946-3858521 Populus trichocarpa
Potri.006G053300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3844946-3854945 Populus trichocarpa
Potri.006G053300 10.0kb downstream 10.0kb downstream 13576 true Chr06: 3854946-3868521 Populus trichocarpa
Potri.006G053300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3858522-3868521 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.171        
cufflinks 4.036       Low
cufflinks 5.235        
cufflinks 5.041        
cufflinks 4.175        
cufflinks 5.614        
cufflinks 3.908       Low
cufflinks 6.144        
cufflinks 12.126     High High
cufflinks 5.383        
cufflinks 5.855        
cufflinks 4.977        
cufflinks 4.99        
cufflinks 12.644     High High
cufflinks 11.766     High High
cufflinks 5.25        
cufflinks 17.311     High High
cufflinks 8.6        
cufflinks 5.342        
cufflinks 6.466        
cufflinks 5.31        
cufflinks 4.245        
cufflinks 7.712        
cufflinks 4.221        
cufflinks 18.41       High
cufflinks 10.517       Low
cufflinks 13.164        
cufflinks 11.115       Low
cufflinks 17.814       High
cufflinks 13.1        

0 Strain