Gene : Potri.006G134200 P. trichocarpa v3.0
Defline:  (1 of 2) 1.5.1.9 - Saccharopine dehydrogenase (NAD(+), L-glutamate-forming) / Saccharopin dehydrogenase Genomic Order:  1342
Name:  ? Potri.006G134200 Secondary Identifier:  ? PAC:27008032
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa LYSINE-DEG1-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G134200 0.5kb upstream 0.5kb upstream 13860 true Chr06: 11042889-11056748 Populus trichocarpa
Potri.006G134200 0.5kb upstream 0.5kb upstream 500 false Chr06: 11056249-11056748 Populus trichocarpa
Potri.006G134200 0.5kb downstream 0.5kb downstream 13860 true Chr06: 11042389-11056248 Populus trichocarpa
Potri.006G134200 0.5kb downstream 0.5kb downstream 500 false Chr06: 11042389-11042888 Populus trichocarpa
Potri.006G134200 1.0kb upstream 1.0kb upstream 14360 true Chr06: 11042889-11057248 Populus trichocarpa
Potri.006G134200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11056249-11057248 Populus trichocarpa
Potri.006G134200 1.0kb downstream 1.0kb downstream 14360 true Chr06: 11041889-11056248 Populus trichocarpa
Potri.006G134200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11041889-11042888 Populus trichocarpa
Potri.006G134200 2.0kb upstream 2.0kb upstream 15360 true Chr06: 11042889-11058248 Populus trichocarpa
Potri.006G134200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11056249-11058248 Populus trichocarpa
Potri.006G134200 2.0kb downstream 2.0kb downstream 15360 true Chr06: 11040889-11056248 Populus trichocarpa
Potri.006G134200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11040889-11042888 Populus trichocarpa
Potri.006G134200 5.0kb upstream 5.0kb upstream 18360 true Chr06: 11042889-11061248 Populus trichocarpa
Potri.006G134200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11056249-11061248 Populus trichocarpa
Potri.006G134200 5.0kb downstream 5.0kb downstream 18360 true Chr06: 11037889-11056248 Populus trichocarpa
Potri.006G134200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11037889-11042888 Populus trichocarpa
Potri.006G134200 10.0kb upstream 10.0kb upstream 23360 true Chr06: 11042889-11066248 Populus trichocarpa
Potri.006G134200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11056249-11066248 Populus trichocarpa
Potri.006G134200 10.0kb downstream 10.0kb downstream 23360 true Chr06: 11032889-11056248 Populus trichocarpa
Potri.006G134200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11032889-11042888 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.013        
cufflinks 1.39        
cufflinks 3.158        
cufflinks 0.671       Low
cufflinks 0.564       Low
cufflinks 3.224        
cufflinks 1.337        
cufflinks 0.601       Low
cufflinks 3.103        
cufflinks 0.661       Low
cufflinks 0.606       Low
cufflinks 2.06        
cufflinks 0.929        
cufflinks 2.816        
cufflinks 0.427       Low
cufflinks 5.322       High
cufflinks 1.573        
cufflinks 7.173       High
cufflinks 0.814        
cufflinks 6.559       High
cufflinks 0.888        
cufflinks 1.492        
cufflinks 1.659        
cufflinks 1.324        
cufflinks 12.376        
cufflinks 13.218        
cufflinks 8.935        
cufflinks 9.283        
cufflinks 6.323        
cufflinks 15.198        

0 Strain