Gene : Potri.009G076100 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR31165//PTHR31165:SF6 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 Genomic Order:  761
Name:  ? Potri.009G076100 Secondary Identifier:  ? PAC:26985760
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G076100 0.5kb upstream 0.5kb upstream 2002 true Chr09: 7393514-7395515 Populus trichocarpa
Potri.009G076100 0.5kb upstream 0.5kb upstream 500 false Chr09: 7393514-7394013 Populus trichocarpa
Potri.009G076100 0.5kb downstream 0.5kb downstream 2002 true Chr09: 7394014-7396015 Populus trichocarpa
Potri.009G076100 0.5kb downstream 0.5kb downstream 500 false Chr09: 7395516-7396015 Populus trichocarpa
Potri.009G076100 1.0kb upstream 1.0kb upstream 2502 true Chr09: 7393014-7395515 Populus trichocarpa
Potri.009G076100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7393014-7394013 Populus trichocarpa
Potri.009G076100 1.0kb downstream 1.0kb downstream 2502 true Chr09: 7394014-7396515 Populus trichocarpa
Potri.009G076100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7395516-7396515 Populus trichocarpa
Potri.009G076100 2.0kb upstream 2.0kb upstream 3502 true Chr09: 7392014-7395515 Populus trichocarpa
Potri.009G076100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7392014-7394013 Populus trichocarpa
Potri.009G076100 2.0kb downstream 2.0kb downstream 3502 true Chr09: 7394014-7397515 Populus trichocarpa
Potri.009G076100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7395516-7397515 Populus trichocarpa
Potri.009G076100 5.0kb upstream 5.0kb upstream 6502 true Chr09: 7389014-7395515 Populus trichocarpa
Potri.009G076100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7389014-7394013 Populus trichocarpa
Potri.009G076100 5.0kb downstream 5.0kb downstream 6502 true Chr09: 7394014-7400515 Populus trichocarpa
Potri.009G076100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7395516-7400515 Populus trichocarpa
Potri.009G076100 10.0kb upstream 10.0kb upstream 11502 true Chr09: 7384014-7395515 Populus trichocarpa
Potri.009G076100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7384014-7394013 Populus trichocarpa
Potri.009G076100 10.0kb downstream 10.0kb downstream 11502 true Chr09: 7394014-7405515 Populus trichocarpa
Potri.009G076100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7395516-7405515 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.382        
cufflinks 2.46       Low
cufflinks 45.045     High High
cufflinks 2.995       Low
cufflinks 4.151        
cufflinks 36.973     High High
cufflinks 23.143     High  
cufflinks 7.111        
cufflinks 17.309     High  
cufflinks 34.609     High High
cufflinks 3.596       Low
cufflinks 7.065        
cufflinks 21.334     High  
cufflinks 4.384        
cufflinks 26.72     High  
cufflinks 26.082     High  
cufflinks 2.003       Low
cufflinks 24.907     High  
cufflinks 18.297     High  
cufflinks 18.769     High  
cufflinks 3.729       Low
cufflinks 24.709     High  
cufflinks 24.896     High  
cufflinks 4.717        
cufflinks 9.189        
cufflinks 17.545       High
cufflinks 4.156       Low
cufflinks 4.429        
cufflinks 14.716        
cufflinks 21.38       High

0 Strain