Gene : Potri.006G078400 P. trichocarpa v3.0
Defline:  (1 of 491) PF01535 - PPR repeat (PPR) Genomic Order:  784
Name:  ? Potri.006G078400 Secondary Identifier:  ? PAC:27007687
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G078400 0.5kb upstream 0.5kb upstream 1349 true Chr06: 5939435-5940783 Populus trichocarpa
Potri.006G078400 0.5kb upstream 0.5kb upstream 500 false Chr06: 5939435-5939934 Populus trichocarpa
Potri.006G078400 0.5kb downstream 0.5kb downstream 1349 true Chr06: 5939935-5941283 Populus trichocarpa
Potri.006G078400 0.5kb downstream 0.5kb downstream 500 false Chr06: 5940784-5941283 Populus trichocarpa
Potri.006G078400 1.0kb upstream 1.0kb upstream 1849 true Chr06: 5938935-5940783 Populus trichocarpa
Potri.006G078400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5938935-5939934 Populus trichocarpa
Potri.006G078400 1.0kb downstream 1.0kb downstream 1849 true Chr06: 5939935-5941783 Populus trichocarpa
Potri.006G078400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5940784-5941783 Populus trichocarpa
Potri.006G078400 2.0kb upstream 2.0kb upstream 2849 true Chr06: 5937935-5940783 Populus trichocarpa
Potri.006G078400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5937935-5939934 Populus trichocarpa
Potri.006G078400 2.0kb downstream 2.0kb downstream 2849 true Chr06: 5939935-5942783 Populus trichocarpa
Potri.006G078400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5940784-5942783 Populus trichocarpa
Potri.006G078400 5.0kb upstream 5.0kb upstream 5849 true Chr06: 5934935-5940783 Populus trichocarpa
Potri.006G078400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5934935-5939934 Populus trichocarpa
Potri.006G078400 5.0kb downstream 5.0kb downstream 5849 true Chr06: 5939935-5945783 Populus trichocarpa
Potri.006G078400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5940784-5945783 Populus trichocarpa
Potri.006G078400 10.0kb upstream 10.0kb upstream 10849 true Chr06: 5929935-5940783 Populus trichocarpa
Potri.006G078400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5929935-5939934 Populus trichocarpa
Potri.006G078400 10.0kb downstream 10.0kb downstream 10849 true Chr06: 5939935-5950783 Populus trichocarpa
Potri.006G078400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5940784-5950783 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.031     Low  
cufflinks 0.021     Low  
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.098     Low High
cufflinks 0.062     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.066     Low High
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.045     Low  
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.088     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain