Gene : Potri.006G107700 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR33057:SF22 - OVATE FAMILY PROTEIN 1-RELATED Genomic Order:  1077
Name:  ? Potri.006G107700 Secondary Identifier:  ? PAC:27007639
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G107700 0.5kb upstream 0.5kb upstream 2466 true Chr06: 8398712-8401177 Populus trichocarpa
Potri.006G107700 0.5kb upstream 0.5kb upstream 500 false Chr06: 8400678-8401177 Populus trichocarpa
Potri.006G107700 0.5kb downstream 0.5kb downstream 2466 true Chr06: 8398212-8400677 Populus trichocarpa
Potri.006G107700 0.5kb downstream 0.5kb downstream 500 false Chr06: 8398212-8398711 Populus trichocarpa
Potri.006G107700 1.0kb upstream 1.0kb upstream 2966 true Chr06: 8398712-8401677 Populus trichocarpa
Potri.006G107700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8400678-8401677 Populus trichocarpa
Potri.006G107700 1.0kb downstream 1.0kb downstream 2966 true Chr06: 8397712-8400677 Populus trichocarpa
Potri.006G107700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8397712-8398711 Populus trichocarpa
Potri.006G107700 2.0kb upstream 2.0kb upstream 3966 true Chr06: 8398712-8402677 Populus trichocarpa
Potri.006G107700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8400678-8402677 Populus trichocarpa
Potri.006G107700 2.0kb downstream 2.0kb downstream 3966 true Chr06: 8396712-8400677 Populus trichocarpa
Potri.006G107700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8396712-8398711 Populus trichocarpa
Potri.006G107700 5.0kb upstream 5.0kb upstream 6966 true Chr06: 8398712-8405677 Populus trichocarpa
Potri.006G107700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8400678-8405677 Populus trichocarpa
Potri.006G107700 5.0kb downstream 5.0kb downstream 6966 true Chr06: 8393712-8400677 Populus trichocarpa
Potri.006G107700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8393712-8398711 Populus trichocarpa
Potri.006G107700 10.0kb upstream 10.0kb upstream 11966 true Chr06: 8398712-8410677 Populus trichocarpa
Potri.006G107700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8400678-8410677 Populus trichocarpa
Potri.006G107700 10.0kb downstream 10.0kb downstream 11966 true Chr06: 8388712-8400677 Populus trichocarpa
Potri.006G107700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8388712-8398711 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.106     High High
cufflinks 7.047        
cufflinks 5.98        
cufflinks 10.624     High High
cufflinks 9.658     High  
cufflinks 12.725     High High
cufflinks 1.411       Low
cufflinks 6.126        
cufflinks 6.809        
cufflinks 1.097       Low
cufflinks 8.332        
cufflinks 13.481     High High
cufflinks 9.389        
cufflinks 4.74        
cufflinks 1.935       Low
cufflinks 1.561       Low
cufflinks 1.723       Low
cufflinks 1.717       Low
cufflinks 4.955        
cufflinks 3.952        
cufflinks 5.329        
cufflinks 2.517        
cufflinks 8.493        
cufflinks 6.079        
cufflinks 0.121     Low  
cufflinks 1.334        
cufflinks 13.044       High
cufflinks 1.836        
cufflinks 8.468       High
cufflinks 0.084     Low Low

0 Strain