Gene : Potri.009G078500 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR12300//PTHR12300:SF43 - HVA22-LIKE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  785
Name:  ? Potri.009G078500 Secondary Identifier:  ? PAC:26986959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G078500 0.5kb upstream 0.5kb upstream 4496 true Chr09: 7535486-7539981 Populus trichocarpa
Potri.009G078500 0.5kb upstream 0.5kb upstream 500 false Chr09: 7535486-7535985 Populus trichocarpa
Potri.009G078500 0.5kb downstream 0.5kb downstream 4496 true Chr09: 7535986-7540481 Populus trichocarpa
Potri.009G078500 0.5kb downstream 0.5kb downstream 500 false Chr09: 7539982-7540481 Populus trichocarpa
Potri.009G078500 1.0kb upstream 1.0kb upstream 4996 true Chr09: 7534986-7539981 Populus trichocarpa
Potri.009G078500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7534986-7535985 Populus trichocarpa
Potri.009G078500 1.0kb downstream 1.0kb downstream 4996 true Chr09: 7535986-7540981 Populus trichocarpa
Potri.009G078500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7539982-7540981 Populus trichocarpa
Potri.009G078500 2.0kb upstream 2.0kb upstream 5996 true Chr09: 7533986-7539981 Populus trichocarpa
Potri.009G078500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7533986-7535985 Populus trichocarpa
Potri.009G078500 2.0kb downstream 2.0kb downstream 5996 true Chr09: 7535986-7541981 Populus trichocarpa
Potri.009G078500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7539982-7541981 Populus trichocarpa
Potri.009G078500 5.0kb upstream 5.0kb upstream 8996 true Chr09: 7530986-7539981 Populus trichocarpa
Potri.009G078500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7530986-7535985 Populus trichocarpa
Potri.009G078500 5.0kb downstream 5.0kb downstream 8996 true Chr09: 7535986-7544981 Populus trichocarpa
Potri.009G078500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7539982-7544981 Populus trichocarpa
Potri.009G078500 10.0kb upstream 10.0kb upstream 13996 true Chr09: 7525986-7539981 Populus trichocarpa
Potri.009G078500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7525986-7535985 Populus trichocarpa
Potri.009G078500 10.0kb downstream 10.0kb downstream 13996 true Chr09: 7535986-7549981 Populus trichocarpa
Potri.009G078500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7539982-7549981 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.824        
cufflinks 3.398       High
cufflinks 1.483        
cufflinks 3.512       High
cufflinks 1.518        
cufflinks 0.771       Low
cufflinks 0.99       Low
cufflinks 1.766        
cufflinks 1.633        
cufflinks 0.766       Low
cufflinks 1.667        
cufflinks 0.695       Low
cufflinks 1.656        
cufflinks 3.164       High
cufflinks 2.481        
cufflinks 3.798       High
cufflinks 3.038       High
cufflinks 1.19        
cufflinks 2.316        
cufflinks 2.519        
cufflinks 0.999       Low
cufflinks 2.587        
cufflinks 1.76        
cufflinks 1.376        
cufflinks 9.302        
cufflinks 8.762        
cufflinks 10.613        
cufflinks 17.424       High
cufflinks 17.144       High
cufflinks 9.656        

0 Strain