Gene : Potri.006G049100 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR22912:SF48 - NADPH-DEPENDENT THIOREDOXIN REDUCTASE 3 Genomic Order:  491
Name:  ? Potri.006G049100 Secondary Identifier:  ? PAC:27005329
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa THIOREDOX-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G049100 0.5kb upstream 0.5kb upstream 6345 true Chr06: 3518027-3524371 Populus trichocarpa
Potri.006G049100 0.5kb upstream 0.5kb upstream 500 false Chr06: 3523872-3524371 Populus trichocarpa
Potri.006G049100 0.5kb downstream 0.5kb downstream 6345 true Chr06: 3517527-3523871 Populus trichocarpa
Potri.006G049100 0.5kb downstream 0.5kb downstream 500 false Chr06: 3517527-3518026 Populus trichocarpa
Potri.006G049100 1.0kb upstream 1.0kb upstream 6845 true Chr06: 3518027-3524871 Populus trichocarpa
Potri.006G049100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3523872-3524871 Populus trichocarpa
Potri.006G049100 1.0kb downstream 1.0kb downstream 6845 true Chr06: 3517027-3523871 Populus trichocarpa
Potri.006G049100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3517027-3518026 Populus trichocarpa
Potri.006G049100 2.0kb upstream 2.0kb upstream 7845 true Chr06: 3518027-3525871 Populus trichocarpa
Potri.006G049100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3523872-3525871 Populus trichocarpa
Potri.006G049100 2.0kb downstream 2.0kb downstream 7845 true Chr06: 3516027-3523871 Populus trichocarpa
Potri.006G049100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3516027-3518026 Populus trichocarpa
Potri.006G049100 5.0kb upstream 5.0kb upstream 10845 true Chr06: 3518027-3528871 Populus trichocarpa
Potri.006G049100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3523872-3528871 Populus trichocarpa
Potri.006G049100 5.0kb downstream 5.0kb downstream 10845 true Chr06: 3513027-3523871 Populus trichocarpa
Potri.006G049100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3513027-3518026 Populus trichocarpa
Potri.006G049100 10.0kb upstream 10.0kb upstream 15845 true Chr06: 3518027-3533871 Populus trichocarpa
Potri.006G049100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3523872-3533871 Populus trichocarpa
Potri.006G049100 10.0kb downstream 10.0kb downstream 15845 true Chr06: 3508027-3523871 Populus trichocarpa
Potri.006G049100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3508027-3518026 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.39       High
cufflinks 1.451       Low
cufflinks 9.119     High High
cufflinks 10.614     High High
cufflinks 0.932       Low
cufflinks 1.885        
cufflinks 1.008       Low
cufflinks 2.15        
cufflinks 6.301        
cufflinks 3.33        
cufflinks 5.995        
cufflinks 5.438        
cufflinks 4.644        
cufflinks 2.447        
cufflinks 7.703       High
cufflinks 13.882     High High
cufflinks 1.071       Low
cufflinks 4.274        
cufflinks 2.056        
cufflinks 4.106        
cufflinks 2.103        
cufflinks 9.613     High High
cufflinks 6.099        
cufflinks 2.828        
cufflinks 2.278        
cufflinks 15.717        
cufflinks 16.792        
cufflinks 16.219        
cufflinks 15.35        
cufflinks 14.893        

0 Strain