Gene : Potri.006G158300 P. trichocarpa v3.0
Defline:  (1 of 1) KOG0217 - Mismatch repair ATPase MSH6 (MutS family) Genomic Order:  1583
Name:  ? Potri.006G158300 Secondary Identifier:  ? PAC:27003719
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G158300 0.5kb upstream 0.5kb upstream 12733 true Chr06: 14801424-14814156 Populus trichocarpa
Potri.006G158300 0.5kb upstream 0.5kb upstream 500 false Chr06: 14801424-14801923 Populus trichocarpa
Potri.006G158300 0.5kb downstream 0.5kb downstream 12733 true Chr06: 14801924-14814656 Populus trichocarpa
Potri.006G158300 0.5kb downstream 0.5kb downstream 500 false Chr06: 14814157-14814656 Populus trichocarpa
Potri.006G158300 1.0kb upstream 1.0kb upstream 13233 true Chr06: 14800924-14814156 Populus trichocarpa
Potri.006G158300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14800924-14801923 Populus trichocarpa
Potri.006G158300 1.0kb downstream 1.0kb downstream 13233 true Chr06: 14801924-14815156 Populus trichocarpa
Potri.006G158300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14814157-14815156 Populus trichocarpa
Potri.006G158300 2.0kb upstream 2.0kb upstream 14233 true Chr06: 14799924-14814156 Populus trichocarpa
Potri.006G158300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14799924-14801923 Populus trichocarpa
Potri.006G158300 2.0kb downstream 2.0kb downstream 14233 true Chr06: 14801924-14816156 Populus trichocarpa
Potri.006G158300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14814157-14816156 Populus trichocarpa
Potri.006G158300 5.0kb upstream 5.0kb upstream 17233 true Chr06: 14796924-14814156 Populus trichocarpa
Potri.006G158300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14796924-14801923 Populus trichocarpa
Potri.006G158300 5.0kb downstream 5.0kb downstream 17233 true Chr06: 14801924-14819156 Populus trichocarpa
Potri.006G158300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14814157-14819156 Populus trichocarpa
Potri.006G158300 10.0kb upstream 10.0kb upstream 22233 true Chr06: 14791924-14814156 Populus trichocarpa
Potri.006G158300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14791924-14801923 Populus trichocarpa
Potri.006G158300 10.0kb downstream 10.0kb downstream 22233 true Chr06: 14801924-14824156 Populus trichocarpa
Potri.006G158300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14814157-14824156 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.162        
cufflinks 0.072     Low Low
cufflinks 0.19        
cufflinks 0.201        
cufflinks 0.058     Low Low
cufflinks 0.106     Low  
cufflinks 0.13     Low  
cufflinks 0.166        
cufflinks 0.091     Low  
cufflinks 0.127     Low  
cufflinks 0.064     Low Low
cufflinks 0.191        
cufflinks 0.176        
cufflinks 0.119     Low  
cufflinks 0.28       High
cufflinks 0.095     Low  
cufflinks 0.222       High
cufflinks 0.091     Low  
cufflinks 0.176        
cufflinks 0.317       High
cufflinks 0.083     Low Low
cufflinks 0.298       High
cufflinks 0.1     Low  
cufflinks 0.101     Low  
cufflinks 0.995        
cufflinks 0.748        
cufflinks 0.794        
cufflinks 1.067        
cufflinks 1.283        
cufflinks 0.649       Low

0 Strain