Gene : Potri.006G159200 P. trichocarpa v3.0
Defline:  (1 of 3) K08737 - DNA mismatch repair protein MSH6 (MSH6) Genomic Order:  1592
Name:  ? Potri.006G159200 Secondary Identifier:  ? PAC:27005637
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G159200 0.5kb upstream 0.5kb upstream 14315 true Chr06: 14997573-15011887 Populus trichocarpa
Potri.006G159200 0.5kb upstream 0.5kb upstream 500 false Chr06: 15011388-15011887 Populus trichocarpa
Potri.006G159200 0.5kb downstream 0.5kb downstream 14315 true Chr06: 14997073-15011387 Populus trichocarpa
Potri.006G159200 0.5kb downstream 0.5kb downstream 500 false Chr06: 14997073-14997572 Populus trichocarpa
Potri.006G159200 1.0kb upstream 1.0kb upstream 14815 true Chr06: 14997573-15012387 Populus trichocarpa
Potri.006G159200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15011388-15012387 Populus trichocarpa
Potri.006G159200 1.0kb downstream 1.0kb downstream 14815 true Chr06: 14996573-15011387 Populus trichocarpa
Potri.006G159200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14996573-14997572 Populus trichocarpa
Potri.006G159200 2.0kb upstream 2.0kb upstream 15815 true Chr06: 14997573-15013387 Populus trichocarpa
Potri.006G159200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15011388-15013387 Populus trichocarpa
Potri.006G159200 2.0kb downstream 2.0kb downstream 15815 true Chr06: 14995573-15011387 Populus trichocarpa
Potri.006G159200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14995573-14997572 Populus trichocarpa
Potri.006G159200 5.0kb upstream 5.0kb upstream 18815 true Chr06: 14997573-15016387 Populus trichocarpa
Potri.006G159200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15011388-15016387 Populus trichocarpa
Potri.006G159200 5.0kb downstream 5.0kb downstream 18815 true Chr06: 14992573-15011387 Populus trichocarpa
Potri.006G159200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14992573-14997572 Populus trichocarpa
Potri.006G159200 10.0kb upstream 10.0kb upstream 23815 true Chr06: 14997573-15021387 Populus trichocarpa
Potri.006G159200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15011388-15021387 Populus trichocarpa
Potri.006G159200 10.0kb downstream 10.0kb downstream 23815 true Chr06: 14987573-15011387 Populus trichocarpa
Potri.006G159200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14987573-14997572 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.348        
cufflinks 0.308        
cufflinks 0.152     Low  
cufflinks 0.089     Low Low
cufflinks 0.178        
cufflinks 0.273        
cufflinks 0.505       High
cufflinks 0.203        
cufflinks 0.127        
cufflinks 0.118     Low  
cufflinks 0.313        
cufflinks 0.232        
cufflinks 0.52       High
cufflinks 0.09     Low Low
cufflinks 0.186        
cufflinks 0.65       High
cufflinks 0.157        
cufflinks 0.128        
cufflinks 0.449       High
cufflinks 0.054     Low Low
cufflinks 0.127     Low  
cufflinks 0.111     Low  
cufflinks 0.172        
cufflinks 0.206        
cufflinks 0.099     Low Low
cufflinks 1.426        
cufflinks 1.337        
cufflinks 1.651        
cufflinks 1.501        
cufflinks 2.045        

0 Strain