Gene : Potri.006G131500 P. trichocarpa v3.0
Defline:  (1 of 4) PTHR11652//PTHR11652:SF16 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER // 40S RIBOSOMAL PROTEIN S23-1 Genomic Order:  1315
Name:  ? Potri.006G131500 Secondary Identifier:  ? PAC:27005902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G131500 0.5kb upstream 0.5kb upstream 2431 true Chr06: 10779354-10781784 Populus trichocarpa
Potri.006G131500 0.5kb upstream 0.5kb upstream 500 false Chr06: 10779354-10779853 Populus trichocarpa
Potri.006G131500 0.5kb downstream 0.5kb downstream 2431 true Chr06: 10779854-10782284 Populus trichocarpa
Potri.006G131500 0.5kb downstream 0.5kb downstream 500 false Chr06: 10781785-10782284 Populus trichocarpa
Potri.006G131500 1.0kb upstream 1.0kb upstream 2931 true Chr06: 10778854-10781784 Populus trichocarpa
Potri.006G131500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10778854-10779853 Populus trichocarpa
Potri.006G131500 1.0kb downstream 1.0kb downstream 2931 true Chr06: 10779854-10782784 Populus trichocarpa
Potri.006G131500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10781785-10782784 Populus trichocarpa
Potri.006G131500 2.0kb upstream 2.0kb upstream 3931 true Chr06: 10777854-10781784 Populus trichocarpa
Potri.006G131500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10777854-10779853 Populus trichocarpa
Potri.006G131500 2.0kb downstream 2.0kb downstream 3931 true Chr06: 10779854-10783784 Populus trichocarpa
Potri.006G131500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10781785-10783784 Populus trichocarpa
Potri.006G131500 5.0kb upstream 5.0kb upstream 6931 true Chr06: 10774854-10781784 Populus trichocarpa
Potri.006G131500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10774854-10779853 Populus trichocarpa
Potri.006G131500 5.0kb downstream 5.0kb downstream 6931 true Chr06: 10779854-10786784 Populus trichocarpa
Potri.006G131500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10781785-10786784 Populus trichocarpa
Potri.006G131500 10.0kb upstream 10.0kb upstream 11931 true Chr06: 10769854-10781784 Populus trichocarpa
Potri.006G131500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10769854-10779853 Populus trichocarpa
Potri.006G131500 10.0kb downstream 10.0kb downstream 11931 true Chr06: 10779854-10791784 Populus trichocarpa
Potri.006G131500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10781785-10791784 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.444     High  
cufflinks 68.655     High High
cufflinks 35.863     High Low
cufflinks 35.213     High Low
cufflinks 63.966     High  
cufflinks 35.201     High Low
cufflinks 79.257     High High
cufflinks 34.495     High Low
cufflinks 34.745     High Low
cufflinks 32.543     High Low
cufflinks 50.121     High  
cufflinks 58.535     High  
cufflinks 45.33     High  
cufflinks 56.3     High  
cufflinks 49.714     High  
cufflinks 47.819     High  
cufflinks 42.366     High  
cufflinks 52.986     High  
cufflinks 49.452     High  
cufflinks 31.299     High Low
cufflinks 88.444     High High
cufflinks 67.158     High  
cufflinks 74.498     High High
cufflinks 72.767     High High
cufflinks 62.15     High  
cufflinks 33.572     High  
cufflinks 51.985     High  
cufflinks 73.425     High  
cufflinks 141.27     High  
cufflinks 36.805     High  

0 Strain