Gene : Potri.009G082100 P. trichocarpa v3.0
Defline:  (1 of 4) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  821
Name:  ? Potri.009G082100 Secondary Identifier:  ? PAC:26986848
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-724 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5097 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G082100 0.5kb upstream 0.5kb upstream 5064 true Chr09: 7780053-7785116 Populus trichocarpa
Potri.009G082100 0.5kb upstream 0.5kb upstream 500 false Chr09: 7784617-7785116 Populus trichocarpa
Potri.009G082100 0.5kb downstream 0.5kb downstream 5064 true Chr09: 7779553-7784616 Populus trichocarpa
Potri.009G082100 0.5kb downstream 0.5kb downstream 500 false Chr09: 7779553-7780052 Populus trichocarpa
Potri.009G082100 1.0kb upstream 1.0kb upstream 5564 true Chr09: 7780053-7785616 Populus trichocarpa
Potri.009G082100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7784617-7785616 Populus trichocarpa
Potri.009G082100 1.0kb downstream 1.0kb downstream 5564 true Chr09: 7779053-7784616 Populus trichocarpa
Potri.009G082100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7779053-7780052 Populus trichocarpa
Potri.009G082100 2.0kb upstream 2.0kb upstream 6564 true Chr09: 7780053-7786616 Populus trichocarpa
Potri.009G082100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7784617-7786616 Populus trichocarpa
Potri.009G082100 2.0kb downstream 2.0kb downstream 6564 true Chr09: 7778053-7784616 Populus trichocarpa
Potri.009G082100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7778053-7780052 Populus trichocarpa
Potri.009G082100 5.0kb upstream 5.0kb upstream 9564 true Chr09: 7780053-7789616 Populus trichocarpa
Potri.009G082100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7784617-7789616 Populus trichocarpa
Potri.009G082100 5.0kb downstream 5.0kb downstream 9564 true Chr09: 7775053-7784616 Populus trichocarpa
Potri.009G082100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7775053-7780052 Populus trichocarpa
Potri.009G082100 10.0kb upstream 10.0kb upstream 14564 true Chr09: 7780053-7794616 Populus trichocarpa
Potri.009G082100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7784617-7794616 Populus trichocarpa
Potri.009G082100 10.0kb downstream 10.0kb downstream 14564 true Chr09: 7770053-7784616 Populus trichocarpa
Potri.009G082100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7770053-7780052 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.635     High  
cufflinks 12.798     High  
cufflinks 12.202     High  
cufflinks 8.978        
cufflinks 8.778     High Low
cufflinks 10.513     High  
cufflinks 13.22     High  
cufflinks 10.192        
cufflinks 5.841       Low
cufflinks 8.723       Low
cufflinks 11.229     High  
cufflinks 14.183     High  
cufflinks 11.544     High  
cufflinks 15.298     High  
cufflinks 23.352     High High
cufflinks 11.464     High  
cufflinks 18.411     High High
cufflinks 10.653     High  
cufflinks 10.276     High  
cufflinks 11.427     High  
cufflinks 17.071     High High
cufflinks 18.277     High High
cufflinks 13.613     High  
cufflinks 20.606     High High
cufflinks 29.82     High  
cufflinks 19.427        
cufflinks 19.89        
cufflinks 23.269        
cufflinks 35.29     High  
cufflinks 22.395        

0 Strain