Gene : Potri.006G277400 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR12321//PTHR12321:SF41 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2774
Name:  ? Potri.006G277400 Secondary Identifier:  ? PAC:27006707
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G277400 0.5kb upstream 0.5kb upstream 7208 true Chr06: 27676864-27684071 Populus trichocarpa
Potri.006G277400 0.5kb upstream 0.5kb upstream 500 false Chr06: 27676864-27677363 Populus trichocarpa
Potri.006G277400 0.5kb downstream 0.5kb downstream 7208 true Chr06: 27677364-27684571 Populus trichocarpa
Potri.006G277400 0.5kb downstream 0.5kb downstream 500 false Chr06: 27684072-27684571 Populus trichocarpa
Potri.006G277400 1.0kb upstream 1.0kb upstream 7708 true Chr06: 27676364-27684071 Populus trichocarpa
Potri.006G277400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27676364-27677363 Populus trichocarpa
Potri.006G277400 1.0kb downstream 1.0kb downstream 7708 true Chr06: 27677364-27685071 Populus trichocarpa
Potri.006G277400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27684072-27685071 Populus trichocarpa
Potri.006G277400 2.0kb upstream 2.0kb upstream 8708 true Chr06: 27675364-27684071 Populus trichocarpa
Potri.006G277400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27675364-27677363 Populus trichocarpa
Potri.006G277400 2.0kb downstream 2.0kb downstream 8708 true Chr06: 27677364-27686071 Populus trichocarpa
Potri.006G277400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27684072-27686071 Populus trichocarpa
Potri.006G277400 5.0kb upstream 5.0kb upstream 11708 true Chr06: 27672364-27684071 Populus trichocarpa
Potri.006G277400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27672364-27677363 Populus trichocarpa
Potri.006G277400 5.0kb downstream 5.0kb downstream 11708 true Chr06: 27677364-27689071 Populus trichocarpa
Potri.006G277400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27684072-27689071 Populus trichocarpa
Potri.006G277400 10.0kb upstream 10.0kb upstream 16708 true Chr06: 27667364-27684071 Populus trichocarpa
Potri.006G277400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27667364-27677363 Populus trichocarpa
Potri.006G277400 10.0kb downstream 10.0kb downstream 16708 true Chr06: 27677364-27694071 Populus trichocarpa
Potri.006G277400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27684072-27694071 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.453        
cufflinks 1.354       High
cufflinks 0.256        
cufflinks 0.07     Low Low
cufflinks 0.189        
cufflinks 0.534        
cufflinks 0.275        
cufflinks 0.111     Low  
cufflinks 0.122     Low  
cufflinks 0.1     Low Low
cufflinks 0.287        
cufflinks 0.107     Low Low
cufflinks 0.143     Low  
cufflinks 0.27        
cufflinks 0.833       High
cufflinks 0.562        
cufflinks 0.439        
cufflinks 0.811       High
cufflinks 0.061     Low Low
cufflinks 0.094     Low Low
cufflinks 0.606       High
cufflinks 0.142        
cufflinks 0.389        
cufflinks 0.409        
cufflinks 0.3     Low  
cufflinks 0.888        
cufflinks 1.206        
cufflinks 1.262        
cufflinks 1.946       High
cufflinks 0.379        

0 Strain