Gene : Potri.007G017000 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR11945//PTHR11945:SF173//PTHR11945:SF219 - MADS BOX PROTEIN // MADS-BOX FAMILY PROTEIN // FLORAL HOMEOTIC PROTEIN APETALA 3 Genomic Order:  170
Name:  ? Potri.007G017000 Secondary Identifier:  ? PAC:27014437
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G017000 0.5kb upstream 0.5kb upstream 2829 true Chr07: 1305851-1308679 Populus trichocarpa
Potri.007G017000 0.5kb upstream 0.5kb upstream 500 false Chr07: 1308180-1308679 Populus trichocarpa
Potri.007G017000 0.5kb downstream 0.5kb downstream 2829 true Chr07: 1305351-1308179 Populus trichocarpa
Potri.007G017000 0.5kb downstream 0.5kb downstream 500 false Chr07: 1305351-1305850 Populus trichocarpa
Potri.007G017000 1.0kb upstream 1.0kb upstream 3329 true Chr07: 1305851-1309179 Populus trichocarpa
Potri.007G017000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1308180-1309179 Populus trichocarpa
Potri.007G017000 1.0kb downstream 1.0kb downstream 3329 true Chr07: 1304851-1308179 Populus trichocarpa
Potri.007G017000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1304851-1305850 Populus trichocarpa
Potri.007G017000 2.0kb upstream 2.0kb upstream 4329 true Chr07: 1305851-1310179 Populus trichocarpa
Potri.007G017000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1308180-1310179 Populus trichocarpa
Potri.007G017000 2.0kb downstream 2.0kb downstream 4329 true Chr07: 1303851-1308179 Populus trichocarpa
Potri.007G017000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1303851-1305850 Populus trichocarpa
Potri.007G017000 5.0kb upstream 5.0kb upstream 7329 true Chr07: 1305851-1313179 Populus trichocarpa
Potri.007G017000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1308180-1313179 Populus trichocarpa
Potri.007G017000 5.0kb downstream 5.0kb downstream 7329 true Chr07: 1300851-1308179 Populus trichocarpa
Potri.007G017000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1300851-1305850 Populus trichocarpa
Potri.007G017000 10.0kb upstream 10.0kb upstream 12329 true Chr07: 1305851-1318179 Populus trichocarpa
Potri.007G017000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1308180-1318179 Populus trichocarpa
Potri.007G017000 10.0kb downstream 10.0kb downstream 12329 true Chr07: 1295851-1308179 Populus trichocarpa
Potri.007G017000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1295851-1305850 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.432        
cufflinks 0.073     Low  
cufflinks 0.005     Low Low
cufflinks 0.013     Low Low
cufflinks 0.594        
cufflinks 0.382        
cufflinks 30.484     High High
cufflinks 0.023     Low Low
cufflinks 1.067        
cufflinks 13.132     High High
cufflinks 0.059     Low  
cufflinks 45.332     High High
cufflinks 20.099     High High
cufflinks 1.403        
cufflinks 17.202     High High
cufflinks 61.9     High High
cufflinks 0.016     Low Low
cufflinks 0.107     Low  
cufflinks 0.132     Low  
cufflinks 0.225        
cufflinks 0.197        
cufflinks 0.584        
cufflinks 0.235        
cufflinks 0.453        
cufflinks 0.239        
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085     Low  
cufflinks 0.313     Low  

0 Strain