Gene : Potri.015G028700 P. trichocarpa v3.0
Defline:  (1 of 8) PF05553//PF14364 - Cotton fibre expressed protein (DUF761) // Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  287
Name:  ? Potri.015G028700 Secondary Identifier:  ? PAC:27018384
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G028700 0.5kb upstream 0.5kb upstream 2473 true Chr15: 2316131-2318603 Populus trichocarpa
Potri.015G028700 0.5kb upstream 0.5kb upstream 500 false Chr15: 2316131-2316630 Populus trichocarpa
Potri.015G028700 0.5kb downstream 0.5kb downstream 2473 true Chr15: 2316631-2319103 Populus trichocarpa
Potri.015G028700 0.5kb downstream 0.5kb downstream 500 false Chr15: 2318604-2319103 Populus trichocarpa
Potri.015G028700 1.0kb upstream 1.0kb upstream 2973 true Chr15: 2315631-2318603 Populus trichocarpa
Potri.015G028700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 2315631-2316630 Populus trichocarpa
Potri.015G028700 1.0kb downstream 1.0kb downstream 2973 true Chr15: 2316631-2319603 Populus trichocarpa
Potri.015G028700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 2318604-2319603 Populus trichocarpa
Potri.015G028700 2.0kb upstream 2.0kb upstream 3973 true Chr15: 2314631-2318603 Populus trichocarpa
Potri.015G028700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 2314631-2316630 Populus trichocarpa
Potri.015G028700 2.0kb downstream 2.0kb downstream 3973 true Chr15: 2316631-2320603 Populus trichocarpa
Potri.015G028700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 2318604-2320603 Populus trichocarpa
Potri.015G028700 5.0kb upstream 5.0kb upstream 6973 true Chr15: 2311631-2318603 Populus trichocarpa
Potri.015G028700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 2311631-2316630 Populus trichocarpa
Potri.015G028700 5.0kb downstream 5.0kb downstream 6973 true Chr15: 2316631-2323603 Populus trichocarpa
Potri.015G028700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 2318604-2323603 Populus trichocarpa
Potri.015G028700 10.0kb upstream 10.0kb upstream 11973 true Chr15: 2306631-2318603 Populus trichocarpa
Potri.015G028700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 2306631-2316630 Populus trichocarpa
Potri.015G028700 10.0kb downstream 10.0kb downstream 11973 true Chr15: 2316631-2328603 Populus trichocarpa
Potri.015G028700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 2318604-2328603 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.358        
cufflinks 1.479       Low
cufflinks 5.819        
cufflinks 14.552     High High
cufflinks 2.624       Low
cufflinks 12.564     High High
cufflinks 5.832        
cufflinks 2.866       Low
cufflinks 10.93     High  
cufflinks 13.655     High High
cufflinks 5.921        
cufflinks 4.894        
cufflinks 2.425       Low
cufflinks 11.223     High High
cufflinks 3.88        
cufflinks 6.847        
cufflinks 12.104     High High
cufflinks 4.347        
cufflinks 3.555        
cufflinks 9.747        
cufflinks 4.146        
cufflinks 13.459     High High
cufflinks 3.761        
cufflinks 4.739        
cufflinks 1.063        
cufflinks 0.039     Low Low
cufflinks 0.232     Low  
cufflinks 2.001       High
cufflinks 3.104       High
cufflinks 0.229     Low  

0 Strain