Gene : Potri.007G112600 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 Genomic Order:  1126
Name:  ? Potri.007G112600 Secondary Identifier:  ? PAC:27016624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G112600 0.5kb upstream 0.5kb upstream 4260 true Chr07: 13493949-13498208 Populus trichocarpa
Potri.007G112600 0.5kb upstream 0.5kb upstream 500 false Chr07: 13493949-13494448 Populus trichocarpa
Potri.007G112600 0.5kb downstream 0.5kb downstream 4260 true Chr07: 13494449-13498708 Populus trichocarpa
Potri.007G112600 0.5kb downstream 0.5kb downstream 500 false Chr07: 13498209-13498708 Populus trichocarpa
Potri.007G112600 1.0kb upstream 1.0kb upstream 4760 true Chr07: 13493449-13498208 Populus trichocarpa
Potri.007G112600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 13493449-13494448 Populus trichocarpa
Potri.007G112600 1.0kb downstream 1.0kb downstream 4760 true Chr07: 13494449-13499208 Populus trichocarpa
Potri.007G112600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 13498209-13499208 Populus trichocarpa
Potri.007G112600 2.0kb upstream 2.0kb upstream 5760 true Chr07: 13492449-13498208 Populus trichocarpa
Potri.007G112600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 13492449-13494448 Populus trichocarpa
Potri.007G112600 2.0kb downstream 2.0kb downstream 5760 true Chr07: 13494449-13500208 Populus trichocarpa
Potri.007G112600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 13498209-13500208 Populus trichocarpa
Potri.007G112600 5.0kb upstream 5.0kb upstream 8760 true Chr07: 13489449-13498208 Populus trichocarpa
Potri.007G112600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 13489449-13494448 Populus trichocarpa
Potri.007G112600 5.0kb downstream 5.0kb downstream 8760 true Chr07: 13494449-13503208 Populus trichocarpa
Potri.007G112600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 13498209-13503208 Populus trichocarpa
Potri.007G112600 10.0kb upstream 10.0kb upstream 13760 true Chr07: 13484449-13498208 Populus trichocarpa
Potri.007G112600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 13484449-13494448 Populus trichocarpa
Potri.007G112600 10.0kb downstream 10.0kb downstream 13760 true Chr07: 13494449-13508208 Populus trichocarpa
Potri.007G112600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 13498209-13508208 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.064       Low
cufflinks 6.666        
cufflinks 5.503        
cufflinks 4.059       Low
cufflinks 9.969        
cufflinks 7.512        
cufflinks 15.457     High High
cufflinks 10.246     High  
cufflinks 6.037        
cufflinks 6.065        
cufflinks 10.299        
cufflinks 6.482        
cufflinks 8.013        
cufflinks 11.831     High High
cufflinks 6.385        
cufflinks 9.56        
cufflinks 5.709        
cufflinks 8.479        
cufflinks 11.408     High High
cufflinks 11.375     High High
cufflinks 9.822        
cufflinks 4.832       Low
cufflinks 5.97        
cufflinks 7.206        
cufflinks 8.507        
cufflinks 20.203       High
cufflinks 9.537        
cufflinks 12.134        
cufflinks 6.377        
cufflinks 25.237       High

0 Strain