Gene : Potri.008G122200 P. trichocarpa v3.0
Defline:  (1 of 2) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  1222
Name:  ? Potri.008G122200 Secondary Identifier:  ? PAC:27036140
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G122200 0.5kb upstream 0.5kb upstream 9881 true Chr08: 7963491-7973371 Populus trichocarpa
Potri.008G122200 0.5kb upstream 0.5kb upstream 500 false Chr08: 7972872-7973371 Populus trichocarpa
Potri.008G122200 0.5kb downstream 0.5kb downstream 9881 true Chr08: 7962991-7972871 Populus trichocarpa
Potri.008G122200 0.5kb downstream 0.5kb downstream 500 false Chr08: 7962991-7963490 Populus trichocarpa
Potri.008G122200 1.0kb upstream 1.0kb upstream 10381 true Chr08: 7963491-7973871 Populus trichocarpa
Potri.008G122200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7972872-7973871 Populus trichocarpa
Potri.008G122200 1.0kb downstream 1.0kb downstream 10381 true Chr08: 7962491-7972871 Populus trichocarpa
Potri.008G122200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7962491-7963490 Populus trichocarpa
Potri.008G122200 2.0kb upstream 2.0kb upstream 11381 true Chr08: 7963491-7974871 Populus trichocarpa
Potri.008G122200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7972872-7974871 Populus trichocarpa
Potri.008G122200 2.0kb downstream 2.0kb downstream 11381 true Chr08: 7961491-7972871 Populus trichocarpa
Potri.008G122200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7961491-7963490 Populus trichocarpa
Potri.008G122200 5.0kb upstream 5.0kb upstream 14381 true Chr08: 7963491-7977871 Populus trichocarpa
Potri.008G122200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7972872-7977871 Populus trichocarpa
Potri.008G122200 5.0kb downstream 5.0kb downstream 14381 true Chr08: 7958491-7972871 Populus trichocarpa
Potri.008G122200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7958491-7963490 Populus trichocarpa
Potri.008G122200 10.0kb upstream 10.0kb upstream 19381 true Chr08: 7963491-7982871 Populus trichocarpa
Potri.008G122200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7972872-7982871 Populus trichocarpa
Potri.008G122200 10.0kb downstream 10.0kb downstream 19381 true Chr08: 7953491-7972871 Populus trichocarpa
Potri.008G122200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7953491-7963490 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.361        
cufflinks 1.103       Low
cufflinks 1.832        
cufflinks 1.185        
cufflinks 1.03       Low
cufflinks 2.398       High
cufflinks 1.176        
cufflinks 2.131       High
cufflinks 2.193       High
cufflinks 0.959       Low
cufflinks 1.067       Low
cufflinks 1.524        
cufflinks 1.326        
cufflinks 1.891       High
cufflinks 1.613        
cufflinks 1.721        
cufflinks 1.612        
cufflinks 1.118       Low
cufflinks 1.808        
cufflinks 1.237        
cufflinks 1.469        
cufflinks 1.591        
cufflinks 1.373        
cufflinks 1.494        
cufflinks 40.655     High  
cufflinks 28.375     High Low
cufflinks 27.684     High Low
cufflinks 35.711     High  
cufflinks 39.244     High  
cufflinks 41.874     High High

0 Strain