Gene : Potri.008G170300 P. trichocarpa v3.0
Defline:  (1 of 6) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  1703
Name:  ? Potri.008G170300 Secondary Identifier:  ? PAC:27038802
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-4942 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G170300 0.5kb upstream 0.5kb upstream 12541 true Chr08: 11637823-11650363 Populus trichocarpa
Potri.008G170300 0.5kb upstream 0.5kb upstream 500 false Chr08: 11637823-11638322 Populus trichocarpa
Potri.008G170300 0.5kb downstream 0.5kb downstream 12541 true Chr08: 11638323-11650863 Populus trichocarpa
Potri.008G170300 0.5kb downstream 0.5kb downstream 500 false Chr08: 11650364-11650863 Populus trichocarpa
Potri.008G170300 1.0kb upstream 1.0kb upstream 13041 true Chr08: 11637323-11650363 Populus trichocarpa
Potri.008G170300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11637323-11638322 Populus trichocarpa
Potri.008G170300 1.0kb downstream 1.0kb downstream 13041 true Chr08: 11638323-11651363 Populus trichocarpa
Potri.008G170300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11650364-11651363 Populus trichocarpa
Potri.008G170300 2.0kb upstream 2.0kb upstream 14041 true Chr08: 11636323-11650363 Populus trichocarpa
Potri.008G170300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11636323-11638322 Populus trichocarpa
Potri.008G170300 2.0kb downstream 2.0kb downstream 14041 true Chr08: 11638323-11652363 Populus trichocarpa
Potri.008G170300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11650364-11652363 Populus trichocarpa
Potri.008G170300 5.0kb upstream 5.0kb upstream 17041 true Chr08: 11633323-11650363 Populus trichocarpa
Potri.008G170300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11633323-11638322 Populus trichocarpa
Potri.008G170300 5.0kb downstream 5.0kb downstream 17041 true Chr08: 11638323-11655363 Populus trichocarpa
Potri.008G170300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11650364-11655363 Populus trichocarpa
Potri.008G170300 10.0kb upstream 10.0kb upstream 22041 true Chr08: 11628323-11650363 Populus trichocarpa
Potri.008G170300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11628323-11638322 Populus trichocarpa
Potri.008G170300 10.0kb downstream 10.0kb downstream 22041 true Chr08: 11638323-11660363 Populus trichocarpa
Potri.008G170300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11650364-11660363 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.747        
cufflinks 0.032     Low Low
cufflinks 2.764        
cufflinks 0.002     Low Low
cufflinks 1.041        
cufflinks 0.394        
cufflinks 0.321        
cufflinks 0.161        
cufflinks 0.685        
cufflinks 2.299        
cufflinks 0.487        
cufflinks 0.466        
cufflinks 2.054        
cufflinks 1.143        
cufflinks 1.958        
cufflinks 0.003     Low Low
cufflinks 1.324        
cufflinks 0.29        
cufflinks 0.002     Low Low
cufflinks 2.061        
cufflinks 1.974        
cufflinks 0.811        
cufflinks 0.622        
cufflinks 0.737        
cufflinks 0.162        
cufflinks 5.886       Low
cufflinks 11.066        
cufflinks 5.464       Low
cufflinks 11.188        
cufflinks 12.891        

0 Strain