Gene : Potri.008G081200 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR12706//PTHR12706:SF13 - STRAWBERRY NOTCH-RELATED // RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  812
Name:  ? Potri.008G081200 Secondary Identifier:  ? PAC:27039872
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G081200 0.5kb upstream 0.5kb upstream 17686 true Chr08: 5100125-5117810 Populus trichocarpa
Potri.008G081200 0.5kb upstream 0.5kb upstream 500 false Chr08: 5117311-5117810 Populus trichocarpa
Potri.008G081200 0.5kb downstream 0.5kb downstream 17686 true Chr08: 5099625-5117310 Populus trichocarpa
Potri.008G081200 0.5kb downstream 0.5kb downstream 500 false Chr08: 5099625-5100124 Populus trichocarpa
Potri.008G081200 1.0kb upstream 1.0kb upstream 18186 true Chr08: 5100125-5118310 Populus trichocarpa
Potri.008G081200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5117311-5118310 Populus trichocarpa
Potri.008G081200 1.0kb downstream 1.0kb downstream 18186 true Chr08: 5099125-5117310 Populus trichocarpa
Potri.008G081200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5099125-5100124 Populus trichocarpa
Potri.008G081200 2.0kb upstream 2.0kb upstream 19186 true Chr08: 5100125-5119310 Populus trichocarpa
Potri.008G081200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5117311-5119310 Populus trichocarpa
Potri.008G081200 2.0kb downstream 2.0kb downstream 19186 true Chr08: 5098125-5117310 Populus trichocarpa
Potri.008G081200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5098125-5100124 Populus trichocarpa
Potri.008G081200 5.0kb upstream 5.0kb upstream 22186 true Chr08: 5100125-5122310 Populus trichocarpa
Potri.008G081200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5117311-5122310 Populus trichocarpa
Potri.008G081200 5.0kb downstream 5.0kb downstream 22186 true Chr08: 5095125-5117310 Populus trichocarpa
Potri.008G081200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5095125-5100124 Populus trichocarpa
Potri.008G081200 10.0kb upstream 10.0kb upstream 27186 true Chr08: 5100125-5127310 Populus trichocarpa
Potri.008G081200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5117311-5127310 Populus trichocarpa
Potri.008G081200 10.0kb downstream 10.0kb downstream 27186 true Chr08: 5090125-5117310 Populus trichocarpa
Potri.008G081200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5090125-5100124 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.194        
cufflinks 0.299        
cufflinks 0.173        
cufflinks 0.129     Low Low
cufflinks 0.161     Low  
cufflinks 0.424       High
cufflinks 0.142     Low  
cufflinks 0.219        
cufflinks 0.586       High
cufflinks 0.17        
cufflinks 0.308        
cufflinks 0.31        
cufflinks 0.363        
cufflinks 0.146     Low  
cufflinks 0.242        
cufflinks 0.207        
cufflinks 0.553       High
cufflinks 0.075     Low Low
cufflinks 0.2        
cufflinks 0.135       Low
cufflinks 0.201        
cufflinks 0.374        
cufflinks 0.147     Low  
cufflinks 0.376       High
cufflinks 1.377       Low
cufflinks 2.254       High
cufflinks 2.366       High
cufflinks 2.106        
cufflinks 1.982        
cufflinks 1.97        

0 Strain