Gene : Potri.007G147300 P. trichocarpa v3.0
Defline:  (1 of 1) K00297 - methylenetetrahydrofolate reductase (NADPH) (metF, MTHFR) Genomic Order:  1473
Name:  ? Potri.007G147300 Secondary Identifier:  ? PAC:27014467
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-3841 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G147300 0.5kb upstream 0.5kb upstream 5103 true Chr07: 15604291-15609393 Populus trichocarpa
Potri.007G147300 0.5kb upstream 0.5kb upstream 500 false Chr07: 15604291-15604790 Populus trichocarpa
Potri.007G147300 0.5kb downstream 0.5kb downstream 5103 true Chr07: 15604791-15609893 Populus trichocarpa
Potri.007G147300 0.5kb downstream 0.5kb downstream 500 false Chr07: 15609394-15609893 Populus trichocarpa
Potri.007G147300 1.0kb upstream 1.0kb upstream 5603 true Chr07: 15603791-15609393 Populus trichocarpa
Potri.007G147300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15603791-15604790 Populus trichocarpa
Potri.007G147300 1.0kb downstream 1.0kb downstream 5603 true Chr07: 15604791-15610393 Populus trichocarpa
Potri.007G147300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15609394-15610393 Populus trichocarpa
Potri.007G147300 2.0kb upstream 2.0kb upstream 6603 true Chr07: 15602791-15609393 Populus trichocarpa
Potri.007G147300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15602791-15604790 Populus trichocarpa
Potri.007G147300 2.0kb downstream 2.0kb downstream 6123 true Chr07: 15604791-15610913 Populus trichocarpa
Potri.007G147300 2.0kb downstream 2.0kb downstream 1520 false Chr07: 15609394-15610913 Populus trichocarpa
Potri.007G147300 5.0kb upstream 5.0kb upstream 9603 true Chr07: 15599791-15609393 Populus trichocarpa
Potri.007G147300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15599791-15604790 Populus trichocarpa
Potri.007G147300 5.0kb downstream 5.0kb downstream 6123 true Chr07: 15604791-15610913 Populus trichocarpa
Potri.007G147300 5.0kb downstream 5.0kb downstream 1520 false Chr07: 15609394-15610913 Populus trichocarpa
Potri.007G147300 10.0kb upstream 10.0kb upstream 14603 true Chr07: 15594791-15609393 Populus trichocarpa
Potri.007G147300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15594791-15604790 Populus trichocarpa
Potri.007G147300 10.0kb downstream 10.0kb downstream 6123 true Chr07: 15604791-15610913 Populus trichocarpa
Potri.007G147300 10.0kb downstream 10.0kb downstream 1520 false Chr07: 15609394-15610913 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.946     High High
cufflinks 5.835       Low
cufflinks 10.36     High  
cufflinks 4.254       Low
cufflinks 11.356     High  
cufflinks 10.267     High  
cufflinks 10.601     High  
cufflinks 5.544       Low
cufflinks 17.558     High High
cufflinks 7.639        
cufflinks 9.166     High  
cufflinks 14.586     High  
cufflinks 9.113        
cufflinks 4.783       Low
cufflinks 5.908       Low
cufflinks 9.845     High  
cufflinks 23.276     High High
cufflinks 9.869        
cufflinks 16.041     High  
cufflinks 17.331     High High
cufflinks 9.586        
cufflinks 13.932     High  
cufflinks 9.423        
cufflinks 16.329     High High
cufflinks 0.178     Low Low
cufflinks 0.249     Low  
cufflinks 0.37     Low  
cufflinks 0.237     Low  
cufflinks 0.239     Low  
cufflinks 0.362        

0 Strain