Gene : Potri.009G088900 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR22765//PTHR22765:SF54 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // VACUOLAR-SORTING RECEPTOR 3-RELATED Genomic Order:  889
Name:  ? Potri.009G088900 Secondary Identifier:  ? PAC:26988681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G088900 0.5kb upstream 0.5kb upstream 7055 true Chr09: 8198887-8205941 Populus trichocarpa
Potri.009G088900 0.5kb upstream 0.5kb upstream 500 false Chr09: 8198887-8199386 Populus trichocarpa
Potri.009G088900 0.5kb downstream 0.5kb downstream 7055 true Chr09: 8199387-8206441 Populus trichocarpa
Potri.009G088900 0.5kb downstream 0.5kb downstream 500 false Chr09: 8205942-8206441 Populus trichocarpa
Potri.009G088900 1.0kb upstream 1.0kb upstream 7555 true Chr09: 8198387-8205941 Populus trichocarpa
Potri.009G088900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8198387-8199386 Populus trichocarpa
Potri.009G088900 1.0kb downstream 1.0kb downstream 7555 true Chr09: 8199387-8206941 Populus trichocarpa
Potri.009G088900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8205942-8206941 Populus trichocarpa
Potri.009G088900 2.0kb upstream 2.0kb upstream 8555 true Chr09: 8197387-8205941 Populus trichocarpa
Potri.009G088900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8197387-8199386 Populus trichocarpa
Potri.009G088900 2.0kb downstream 2.0kb downstream 8555 true Chr09: 8199387-8207941 Populus trichocarpa
Potri.009G088900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8205942-8207941 Populus trichocarpa
Potri.009G088900 5.0kb upstream 5.0kb upstream 11555 true Chr09: 8194387-8205941 Populus trichocarpa
Potri.009G088900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8194387-8199386 Populus trichocarpa
Potri.009G088900 5.0kb downstream 5.0kb downstream 11555 true Chr09: 8199387-8210941 Populus trichocarpa
Potri.009G088900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8205942-8210941 Populus trichocarpa
Potri.009G088900 10.0kb upstream 10.0kb upstream 16555 true Chr09: 8189387-8205941 Populus trichocarpa
Potri.009G088900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8189387-8199386 Populus trichocarpa
Potri.009G088900 10.0kb downstream 10.0kb downstream 16555 true Chr09: 8199387-8215941 Populus trichocarpa
Potri.009G088900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8205942-8215941 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.134        
cufflinks 4.964       Low
cufflinks 5.102        
cufflinks 9.574       High
cufflinks 9.652       High
cufflinks 7.377        
cufflinks 8.354       High
cufflinks 6.271        
cufflinks 7.575        
cufflinks 4.963       Low
cufflinks 6.083        
cufflinks 7.148        
cufflinks 4.765       Low
cufflinks 5.256        
cufflinks 6.215        
cufflinks 6.239        
cufflinks 5.091        
cufflinks 7.044        
cufflinks 4.364       Low
cufflinks 5.224        
cufflinks 5.537        
cufflinks 5.427        
cufflinks 6.909        
cufflinks 6.657        
cufflinks 50.28     High  
cufflinks 49.854     High  
cufflinks 50.111     High  
cufflinks 46.16     High  
cufflinks 44.822     High  
cufflinks 51.048     High  

0 Strain