Gene : Potri.008G005200 P. trichocarpa v3.0
Defline:  (1 of 3) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  52
Name:  ? Potri.008G005200 Secondary Identifier:  ? PAC:27037760
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-2541 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G005200 0.5kb upstream 0.5kb upstream 5453 true Chr08: 281957-287409 Populus trichocarpa
Potri.008G005200 0.5kb upstream 0.5kb upstream 500 false Chr08: 286910-287409 Populus trichocarpa
Potri.008G005200 0.5kb downstream 0.5kb downstream 5453 true Chr08: 281457-286909 Populus trichocarpa
Potri.008G005200 0.5kb downstream 0.5kb downstream 500 false Chr08: 281457-281956 Populus trichocarpa
Potri.008G005200 1.0kb upstream 1.0kb upstream 5953 true Chr08: 281957-287909 Populus trichocarpa
Potri.008G005200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 286910-287909 Populus trichocarpa
Potri.008G005200 1.0kb downstream 1.0kb downstream 5953 true Chr08: 280957-286909 Populus trichocarpa
Potri.008G005200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 280957-281956 Populus trichocarpa
Potri.008G005200 2.0kb upstream 2.0kb upstream 6953 true Chr08: 281957-288909 Populus trichocarpa
Potri.008G005200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 286910-288909 Populus trichocarpa
Potri.008G005200 2.0kb downstream 2.0kb downstream 6953 true Chr08: 279957-286909 Populus trichocarpa
Potri.008G005200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 279957-281956 Populus trichocarpa
Potri.008G005200 5.0kb upstream 5.0kb upstream 9953 true Chr08: 281957-291909 Populus trichocarpa
Potri.008G005200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 286910-291909 Populus trichocarpa
Potri.008G005200 5.0kb downstream 5.0kb downstream 9953 true Chr08: 276957-286909 Populus trichocarpa
Potri.008G005200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 276957-281956 Populus trichocarpa
Potri.008G005200 10.0kb upstream 10.0kb upstream 14953 true Chr08: 281957-296909 Populus trichocarpa
Potri.008G005200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 286910-296909 Populus trichocarpa
Potri.008G005200 10.0kb downstream 10.0kb downstream 14953 true Chr08: 271957-286909 Populus trichocarpa
Potri.008G005200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 271957-281956 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.44        
cufflinks 8.061        
cufflinks 10.705     High  
cufflinks 4.846        
cufflinks 4.061        
cufflinks 1.438       Low
cufflinks 10.22     High  
cufflinks 16.74     High High
cufflinks 3.067       Low
cufflinks 7.653        
cufflinks 7.932        
cufflinks 5.228        
cufflinks 6.321        
cufflinks 10.332     High  
cufflinks 9.346        
cufflinks 4.304        
cufflinks 2.356       Low
cufflinks 5.65        
cufflinks 17.593     High High
cufflinks 12.792     High  
cufflinks 4.341        
cufflinks 9.715     High  
cufflinks 10.171     High  
cufflinks 15.42     High High
cufflinks 12.462       Low
cufflinks 29.091     High High
cufflinks 28.015     High  
cufflinks 27.999        
cufflinks 26.25        
cufflinks 21.882        

0 Strain