Gene : Potri.008G128900 P. trichocarpa v3.0
Defline:  (1 of 2) 2.4.2.19 - Nicotinate-nucleotide diphosphorylase (carboxylating) / Quinolinate phosphoribosyltransferase (decarboxylating) Genomic Order:  1289
Name:  ? Potri.008G128900 Secondary Identifier:  ? PAC:27037361
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PYRIDNUCSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5653 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G128900 0.5kb upstream 0.5kb upstream 5424 true Chr08: 8410654-8416077 Populus trichocarpa
Potri.008G128900 0.5kb upstream 0.5kb upstream 500 false Chr08: 8415578-8416077 Populus trichocarpa
Potri.008G128900 0.5kb downstream 0.5kb downstream 5424 true Chr08: 8410154-8415577 Populus trichocarpa
Potri.008G128900 0.5kb downstream 0.5kb downstream 500 false Chr08: 8410154-8410653 Populus trichocarpa
Potri.008G128900 1.0kb upstream 1.0kb upstream 5924 true Chr08: 8410654-8416577 Populus trichocarpa
Potri.008G128900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8415578-8416577 Populus trichocarpa
Potri.008G128900 1.0kb downstream 1.0kb downstream 5924 true Chr08: 8409654-8415577 Populus trichocarpa
Potri.008G128900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8409654-8410653 Populus trichocarpa
Potri.008G128900 2.0kb upstream 2.0kb upstream 6924 true Chr08: 8410654-8417577 Populus trichocarpa
Potri.008G128900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8415578-8417577 Populus trichocarpa
Potri.008G128900 2.0kb downstream 2.0kb downstream 6924 true Chr08: 8408654-8415577 Populus trichocarpa
Potri.008G128900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8408654-8410653 Populus trichocarpa
Potri.008G128900 5.0kb upstream 5.0kb upstream 9924 true Chr08: 8410654-8420577 Populus trichocarpa
Potri.008G128900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8415578-8420577 Populus trichocarpa
Potri.008G128900 5.0kb downstream 5.0kb downstream 9924 true Chr08: 8405654-8415577 Populus trichocarpa
Potri.008G128900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8405654-8410653 Populus trichocarpa
Potri.008G128900 10.0kb upstream 10.0kb upstream 14924 true Chr08: 8410654-8425577 Populus trichocarpa
Potri.008G128900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8415578-8425577 Populus trichocarpa
Potri.008G128900 10.0kb downstream 10.0kb downstream 14924 true Chr08: 8400654-8415577 Populus trichocarpa
Potri.008G128900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8400654-8410653 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.032        
cufflinks 4.859        
cufflinks 4.498        
cufflinks 5.65       High
cufflinks 5.233        
cufflinks 5.33        
cufflinks 4.614        
cufflinks 3.661       Low
cufflinks 4.919        
cufflinks 3.672       Low
cufflinks 4.325        
cufflinks 4.425        
cufflinks 4.619        
cufflinks 8.075       High
cufflinks 3.442       Low
cufflinks 5.217        
cufflinks 4.352        
cufflinks 4.546        
cufflinks 4.225        
cufflinks 5.297        
cufflinks 5.462        
cufflinks 3.72       Low
cufflinks 4.754        
cufflinks 3.841       Low
cufflinks 51.778     High  
cufflinks 40.799     High  
cufflinks 37.836     High  
cufflinks 53.188     High High
cufflinks 34.209     High  
cufflinks 40.251     High  

0 Strain