Gene : Potri.008G117300 P. trichocarpa v3.0
Defline:  (1 of 3) 5.3.99.6 - Allene-oxide cyclase Genomic Order:  1173
Name:  ? Potri.008G117300 Secondary Identifier:  ? PAC:27040011
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-735 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G117300 0.5kb upstream 0.5kb upstream 1760 true Chr08: 7540545-7542304 Populus trichocarpa
Potri.008G117300 0.5kb upstream 0.5kb upstream 500 false Chr08: 7540545-7541044 Populus trichocarpa
Potri.008G117300 0.5kb downstream 0.5kb downstream 1760 true Chr08: 7541045-7542804 Populus trichocarpa
Potri.008G117300 0.5kb downstream 0.5kb downstream 500 false Chr08: 7542305-7542804 Populus trichocarpa
Potri.008G117300 1.0kb upstream 1.0kb upstream 2260 true Chr08: 7540045-7542304 Populus trichocarpa
Potri.008G117300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7540045-7541044 Populus trichocarpa
Potri.008G117300 1.0kb downstream 1.0kb downstream 2260 true Chr08: 7541045-7543304 Populus trichocarpa
Potri.008G117300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7542305-7543304 Populus trichocarpa
Potri.008G117300 2.0kb upstream 2.0kb upstream 3260 true Chr08: 7539045-7542304 Populus trichocarpa
Potri.008G117300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7539045-7541044 Populus trichocarpa
Potri.008G117300 2.0kb downstream 2.0kb downstream 3260 true Chr08: 7541045-7544304 Populus trichocarpa
Potri.008G117300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7542305-7544304 Populus trichocarpa
Potri.008G117300 5.0kb upstream 5.0kb upstream 6260 true Chr08: 7536045-7542304 Populus trichocarpa
Potri.008G117300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7536045-7541044 Populus trichocarpa
Potri.008G117300 5.0kb downstream 5.0kb downstream 6260 true Chr08: 7541045-7547304 Populus trichocarpa
Potri.008G117300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7542305-7547304 Populus trichocarpa
Potri.008G117300 10.0kb upstream 10.0kb upstream 11260 true Chr08: 7531045-7542304 Populus trichocarpa
Potri.008G117300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7531045-7541044 Populus trichocarpa
Potri.008G117300 10.0kb downstream 10.0kb downstream 11260 true Chr08: 7541045-7552304 Populus trichocarpa
Potri.008G117300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7542305-7552304 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.01     High  
cufflinks 4.706       Low
cufflinks 8.064        
cufflinks 9.911     High  
cufflinks 12.037     High  
cufflinks 60.116     High High
cufflinks 5.53        
cufflinks 32.683     High High
cufflinks 7.095        
cufflinks 9.654     High  
cufflinks 36.868     High High
cufflinks 8.668     High  
cufflinks 9.718        
cufflinks 5.731        
cufflinks 6.874        
cufflinks 17.752     High  
cufflinks 28.511     High High
cufflinks 48.143     High High
cufflinks 5.558        
cufflinks 5.651        
cufflinks 6.526        
cufflinks 13.645     High  
cufflinks 8.36        
cufflinks 2.406       Low
cufflinks 2.865       High
cufflinks 1.356        
cufflinks 1.383        
cufflinks 1.059        
cufflinks 1.267        
cufflinks 2.5        

0 Strain