Gene : Potri.008G081300 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR10857//PTHR10857:SF47 - COPINE // SUBFAMILY NOT NAMED Genomic Order:  813
Name:  ? Potri.008G081300 Secondary Identifier:  ? PAC:27039729
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G081300 0.5kb upstream 0.5kb upstream 5401 true Chr08: 5121880-5127280 Populus trichocarpa
Potri.008G081300 0.5kb upstream 0.5kb upstream 500 false Chr08: 5121880-5122379 Populus trichocarpa
Potri.008G081300 0.5kb downstream 0.5kb downstream 5401 true Chr08: 5122380-5127780 Populus trichocarpa
Potri.008G081300 0.5kb downstream 0.5kb downstream 500 false Chr08: 5127281-5127780 Populus trichocarpa
Potri.008G081300 1.0kb upstream 1.0kb upstream 5901 true Chr08: 5121380-5127280 Populus trichocarpa
Potri.008G081300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5121380-5122379 Populus trichocarpa
Potri.008G081300 1.0kb downstream 1.0kb downstream 5901 true Chr08: 5122380-5128280 Populus trichocarpa
Potri.008G081300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5127281-5128280 Populus trichocarpa
Potri.008G081300 2.0kb upstream 2.0kb upstream 6901 true Chr08: 5120380-5127280 Populus trichocarpa
Potri.008G081300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5120380-5122379 Populus trichocarpa
Potri.008G081300 2.0kb downstream 2.0kb downstream 6901 true Chr08: 5122380-5129280 Populus trichocarpa
Potri.008G081300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5127281-5129280 Populus trichocarpa
Potri.008G081300 5.0kb upstream 5.0kb upstream 9901 true Chr08: 5117380-5127280 Populus trichocarpa
Potri.008G081300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5117380-5122379 Populus trichocarpa
Potri.008G081300 5.0kb downstream 5.0kb downstream 9901 true Chr08: 5122380-5132280 Populus trichocarpa
Potri.008G081300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5127281-5132280 Populus trichocarpa
Potri.008G081300 10.0kb upstream 10.0kb upstream 14901 true Chr08: 5112380-5127280 Populus trichocarpa
Potri.008G081300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5112380-5122379 Populus trichocarpa
Potri.008G081300 10.0kb downstream 10.0kb downstream 14901 true Chr08: 5122380-5137280 Populus trichocarpa
Potri.008G081300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5127281-5137280 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.931        
cufflinks 0.299        
cufflinks 0.201        
cufflinks 0.029     Low Low
cufflinks 0.151       Low
cufflinks 0.301        
cufflinks 0.923        
cufflinks 0.373        
cufflinks 0.224        
cufflinks 0.335        
cufflinks 1.461       High
cufflinks 0.617        
cufflinks 0.453        
cufflinks 0.216        
cufflinks 0.253        
cufflinks 3.344       High
cufflinks 3.361       High
cufflinks 0.626        
cufflinks 0.841        
cufflinks 0.189        
cufflinks 0.454        
cufflinks 1.502       High
cufflinks 2.08       High
cufflinks 0.432        
cufflinks 0.858        
cufflinks 1.006        
cufflinks 1.133        
cufflinks 1.243        
cufflinks 2.72       High
cufflinks 0.74        

0 Strain