Gene : Potri.008G182300 P. trichocarpa v3.0
Defline:  (1 of 2) K09497 - T-complex protein 1 subunit epsilon (CCT5) Genomic Order:  1823
Name:  ? Potri.008G182300 Secondary Identifier:  ? PAC:27038850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G182300 0.5kb upstream 0.5kb upstream 5527 true Chr08: 12417992-12423518 Populus trichocarpa
Potri.008G182300 0.5kb upstream 0.5kb upstream 500 false Chr08: 12423019-12423518 Populus trichocarpa
Potri.008G182300 0.5kb downstream 0.5kb downstream 5527 true Chr08: 12417492-12423018 Populus trichocarpa
Potri.008G182300 0.5kb downstream 0.5kb downstream 500 false Chr08: 12417492-12417991 Populus trichocarpa
Potri.008G182300 1.0kb upstream 1.0kb upstream 6027 true Chr08: 12417992-12424018 Populus trichocarpa
Potri.008G182300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12423019-12424018 Populus trichocarpa
Potri.008G182300 1.0kb downstream 1.0kb downstream 6027 true Chr08: 12416992-12423018 Populus trichocarpa
Potri.008G182300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12416992-12417991 Populus trichocarpa
Potri.008G182300 2.0kb upstream 2.0kb upstream 7027 true Chr08: 12417992-12425018 Populus trichocarpa
Potri.008G182300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12423019-12425018 Populus trichocarpa
Potri.008G182300 2.0kb downstream 2.0kb downstream 7027 true Chr08: 12415992-12423018 Populus trichocarpa
Potri.008G182300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12415992-12417991 Populus trichocarpa
Potri.008G182300 5.0kb upstream 5.0kb upstream 10027 true Chr08: 12417992-12428018 Populus trichocarpa
Potri.008G182300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12423019-12428018 Populus trichocarpa
Potri.008G182300 5.0kb downstream 5.0kb downstream 10027 true Chr08: 12412992-12423018 Populus trichocarpa
Potri.008G182300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12412992-12417991 Populus trichocarpa
Potri.008G182300 10.0kb upstream 10.0kb upstream 15027 true Chr08: 12417992-12433018 Populus trichocarpa
Potri.008G182300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12423019-12433018 Populus trichocarpa
Potri.008G182300 10.0kb downstream 10.0kb downstream 15027 true Chr08: 12407992-12423018 Populus trichocarpa
Potri.008G182300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12407992-12417991 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.891     High  
cufflinks 8.444       Low
cufflinks 16.664     High High
cufflinks 13.074     High  
cufflinks 9.299     High  
cufflinks 18.844     High High
cufflinks 6.652       Low
cufflinks 12.211     High  
cufflinks 11.568     High  
cufflinks 15.28     High  
cufflinks 17.259     High High
cufflinks 15.058     High  
cufflinks 7.472       Low
cufflinks 11.647     High  
cufflinks 12.535     High  
cufflinks 14.547     High  
cufflinks 10.563     High  
cufflinks 11.07     High  
cufflinks 9.057     High Low
cufflinks 12.898     High  
cufflinks 19.833     High High
cufflinks 11.893     High  
cufflinks 12.819     High  
cufflinks 15.512     High  
cufflinks 82.439     High  
cufflinks 83.392     High  
cufflinks 79.671     High  
cufflinks 102.739     High  
cufflinks 129.009     High High
cufflinks 72.545     High  

0 Strain