Gene : Potri.008G027400 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR23151:SF56 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 1 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL Genomic Order:  274
Name:  ? Potri.008G027400 Secondary Identifier:  ? PAC:27037144
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5173 Populus trichocarpa pathologic  
Ptrichocarpa PYRUVDEHYD-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G027400 0.5kb upstream 0.5kb upstream 9290 true Chr08: 1463436-1472725 Populus trichocarpa
Potri.008G027400 0.5kb upstream 0.5kb upstream 500 false Chr08: 1472226-1472725 Populus trichocarpa
Potri.008G027400 0.5kb downstream 0.5kb downstream 9290 true Chr08: 1462936-1472225 Populus trichocarpa
Potri.008G027400 0.5kb downstream 0.5kb downstream 500 false Chr08: 1462936-1463435 Populus trichocarpa
Potri.008G027400 1.0kb upstream 1.0kb upstream 9790 true Chr08: 1463436-1473225 Populus trichocarpa
Potri.008G027400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1472226-1473225 Populus trichocarpa
Potri.008G027400 1.0kb downstream 1.0kb downstream 9790 true Chr08: 1462436-1472225 Populus trichocarpa
Potri.008G027400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1462436-1463435 Populus trichocarpa
Potri.008G027400 2.0kb upstream 2.0kb upstream 10790 true Chr08: 1463436-1474225 Populus trichocarpa
Potri.008G027400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1472226-1474225 Populus trichocarpa
Potri.008G027400 2.0kb downstream 2.0kb downstream 10790 true Chr08: 1461436-1472225 Populus trichocarpa
Potri.008G027400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1461436-1463435 Populus trichocarpa
Potri.008G027400 5.0kb upstream 5.0kb upstream 13790 true Chr08: 1463436-1477225 Populus trichocarpa
Potri.008G027400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1472226-1477225 Populus trichocarpa
Potri.008G027400 5.0kb downstream 5.0kb downstream 13790 true Chr08: 1458436-1472225 Populus trichocarpa
Potri.008G027400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1458436-1463435 Populus trichocarpa
Potri.008G027400 10.0kb upstream 10.0kb upstream 18790 true Chr08: 1463436-1482225 Populus trichocarpa
Potri.008G027400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1472226-1482225 Populus trichocarpa
Potri.008G027400 10.0kb downstream 10.0kb downstream 18790 true Chr08: 1453436-1472225 Populus trichocarpa
Potri.008G027400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1453436-1463435 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.787       High
cufflinks 1.628       Low
cufflinks 4.784       High
cufflinks 2.11        
cufflinks 1.776       Low
cufflinks 2.495        
cufflinks 2.787        
cufflinks 3.01        
cufflinks 2.179        
cufflinks 3.815       High
cufflinks 2.486        
cufflinks 2.222        
cufflinks 2.832        
cufflinks 2.994        
cufflinks 1.344       Low
cufflinks 4.312       High
cufflinks 2.287        
cufflinks 2.806        
cufflinks 2.714        
cufflinks 1.395       Low
cufflinks 3.354        
cufflinks 1.972        
cufflinks 3.058        
cufflinks 3.003        
cufflinks 17.857        
cufflinks 16.4        
cufflinks 15.679        
cufflinks 17.218        
cufflinks 16.34        
cufflinks 17.462        

0 Strain