Gene : Potri.008G171700 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR32080:SF4 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN 11-RELATED Genomic Order:  1717
Name:  ? Potri.008G171700 Secondary Identifier:  ? PAC:27038516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G171700 0.5kb upstream 0.5kb upstream 3286 true Chr08: 11719730-11723015 Populus trichocarpa
Potri.008G171700 0.5kb upstream 0.5kb upstream 500 false Chr08: 11719730-11720229 Populus trichocarpa
Potri.008G171700 0.5kb downstream 0.5kb downstream 3286 true Chr08: 11720230-11723515 Populus trichocarpa
Potri.008G171700 0.5kb downstream 0.5kb downstream 500 false Chr08: 11723016-11723515 Populus trichocarpa
Potri.008G171700 1.0kb upstream 1.0kb upstream 3786 true Chr08: 11719230-11723015 Populus trichocarpa
Potri.008G171700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11719230-11720229 Populus trichocarpa
Potri.008G171700 1.0kb downstream 1.0kb downstream 3786 true Chr08: 11720230-11724015 Populus trichocarpa
Potri.008G171700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11723016-11724015 Populus trichocarpa
Potri.008G171700 2.0kb upstream 2.0kb upstream 4786 true Chr08: 11718230-11723015 Populus trichocarpa
Potri.008G171700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11718230-11720229 Populus trichocarpa
Potri.008G171700 2.0kb downstream 2.0kb downstream 4786 true Chr08: 11720230-11725015 Populus trichocarpa
Potri.008G171700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11723016-11725015 Populus trichocarpa
Potri.008G171700 5.0kb upstream 5.0kb upstream 7786 true Chr08: 11715230-11723015 Populus trichocarpa
Potri.008G171700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11715230-11720229 Populus trichocarpa
Potri.008G171700 5.0kb downstream 5.0kb downstream 7786 true Chr08: 11720230-11728015 Populus trichocarpa
Potri.008G171700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11723016-11728015 Populus trichocarpa
Potri.008G171700 10.0kb upstream 10.0kb upstream 12786 true Chr08: 11710230-11723015 Populus trichocarpa
Potri.008G171700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11710230-11720229 Populus trichocarpa
Potri.008G171700 10.0kb downstream 10.0kb downstream 12786 true Chr08: 11720230-11733015 Populus trichocarpa
Potri.008G171700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11723016-11733015 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.455        
cufflinks 2.411        
cufflinks 4.831        
cufflinks 2.28        
cufflinks 1.749       Low
cufflinks 3.403        
cufflinks 3.605        
cufflinks 3.187        
cufflinks 4.393        
cufflinks 2.946        
cufflinks 1.237       Low
cufflinks 2.352        
cufflinks 3.714        
cufflinks 6.526       High
cufflinks 4.519        
cufflinks 4.275        
cufflinks 4.04        
cufflinks 1.67       Low
cufflinks 1.958       Low
cufflinks 2.71        
cufflinks 3.731        
cufflinks 3.549        
cufflinks 3.791        
cufflinks 4.55        
cufflinks 5.679       High
cufflinks 1.108        
cufflinks 3.934        
cufflinks 5.116        
cufflinks 9.245       High
cufflinks 0.81        

0 Strain