Gene : Potri.015G047500 P. trichocarpa v3.0
Defline:  (1 of 1) K04773 - protease IV [EC:3.4.21.-] (sppA) Genomic Order:  475
Name:  ? Potri.015G047500 Secondary Identifier:  ? PAC:27017484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G047500 0.5kb upstream 0.5kb upstream 8938 true Chr15: 4835693-4844630 Populus trichocarpa
Potri.015G047500 0.5kb upstream 0.5kb upstream 500 false Chr15: 4835693-4836192 Populus trichocarpa
Potri.015G047500 0.5kb downstream 0.5kb downstream 8938 true Chr15: 4836193-4845130 Populus trichocarpa
Potri.015G047500 0.5kb downstream 0.5kb downstream 500 false Chr15: 4844631-4845130 Populus trichocarpa
Potri.015G047500 1.0kb upstream 1.0kb upstream 9438 true Chr15: 4835193-4844630 Populus trichocarpa
Potri.015G047500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4835193-4836192 Populus trichocarpa
Potri.015G047500 1.0kb downstream 1.0kb downstream 9438 true Chr15: 4836193-4845630 Populus trichocarpa
Potri.015G047500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4844631-4845630 Populus trichocarpa
Potri.015G047500 2.0kb upstream 2.0kb upstream 10438 true Chr15: 4834193-4844630 Populus trichocarpa
Potri.015G047500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4834193-4836192 Populus trichocarpa
Potri.015G047500 2.0kb downstream 2.0kb downstream 10438 true Chr15: 4836193-4846630 Populus trichocarpa
Potri.015G047500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4844631-4846630 Populus trichocarpa
Potri.015G047500 5.0kb upstream 5.0kb upstream 13438 true Chr15: 4831193-4844630 Populus trichocarpa
Potri.015G047500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4831193-4836192 Populus trichocarpa
Potri.015G047500 5.0kb downstream 5.0kb downstream 13438 true Chr15: 4836193-4849630 Populus trichocarpa
Potri.015G047500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4844631-4849630 Populus trichocarpa
Potri.015G047500 10.0kb upstream 10.0kb upstream 18438 true Chr15: 4826193-4844630 Populus trichocarpa
Potri.015G047500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4826193-4836192 Populus trichocarpa
Potri.015G047500 10.0kb downstream 10.0kb downstream 18438 true Chr15: 4836193-4854630 Populus trichocarpa
Potri.015G047500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4844631-4854630 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.912        
cufflinks 1.776        
cufflinks 3.713       High
cufflinks 0.677       Low
cufflinks 2.103        
cufflinks 3.483       High
cufflinks 0.788       Low
cufflinks 1.843        
cufflinks 1.36        
cufflinks 1.443        
cufflinks 1.917        
cufflinks 1.154        
cufflinks 2.224        
cufflinks 2.423        
cufflinks 0.788       Low
cufflinks 2.262        
cufflinks 1.881        
cufflinks 1.648        
cufflinks 0.677       Low
cufflinks 2.304        
cufflinks 1.191        
cufflinks 2.532        
cufflinks 1.607        
cufflinks 2.842       High
cufflinks 20.605        
cufflinks 24.273        
cufflinks 23.451        
cufflinks 22.188        
cufflinks 15.854       Low
cufflinks 27.469     High  

0 Strain