Gene : Potri.008G051300 P. trichocarpa v3.0
Defline:  (1 of 26) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  513
Name:  ? Potri.008G051300 Secondary Identifier:  ? PAC:27037525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G051300 0.5kb upstream 0.5kb upstream 6251 true Chr08: 3031700-3037950 Populus trichocarpa
Potri.008G051300 0.5kb upstream 0.5kb upstream 500 false Chr08: 3031700-3032199 Populus trichocarpa
Potri.008G051300 0.5kb downstream 0.5kb downstream 6251 true Chr08: 3032200-3038450 Populus trichocarpa
Potri.008G051300 0.5kb downstream 0.5kb downstream 500 false Chr08: 3037951-3038450 Populus trichocarpa
Potri.008G051300 1.0kb upstream 1.0kb upstream 6751 true Chr08: 3031200-3037950 Populus trichocarpa
Potri.008G051300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3031200-3032199 Populus trichocarpa
Potri.008G051300 1.0kb downstream 1.0kb downstream 6751 true Chr08: 3032200-3038950 Populus trichocarpa
Potri.008G051300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3037951-3038950 Populus trichocarpa
Potri.008G051300 2.0kb upstream 2.0kb upstream 7751 true Chr08: 3030200-3037950 Populus trichocarpa
Potri.008G051300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3030200-3032199 Populus trichocarpa
Potri.008G051300 2.0kb downstream 2.0kb downstream 7751 true Chr08: 3032200-3039950 Populus trichocarpa
Potri.008G051300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3037951-3039950 Populus trichocarpa
Potri.008G051300 5.0kb upstream 5.0kb upstream 10751 true Chr08: 3027200-3037950 Populus trichocarpa
Potri.008G051300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3027200-3032199 Populus trichocarpa
Potri.008G051300 5.0kb downstream 5.0kb downstream 10751 true Chr08: 3032200-3042950 Populus trichocarpa
Potri.008G051300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3037951-3042950 Populus trichocarpa
Potri.008G051300 10.0kb upstream 10.0kb upstream 15751 true Chr08: 3022200-3037950 Populus trichocarpa
Potri.008G051300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3022200-3032199 Populus trichocarpa
Potri.008G051300 10.0kb downstream 10.0kb downstream 15751 true Chr08: 3032200-3047950 Populus trichocarpa
Potri.008G051300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3037951-3047950 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.604        
cufflinks 3.542        
cufflinks 3.866        
cufflinks 4.651        
cufflinks 8.379       High
cufflinks 2.267       Low
cufflinks 8.055       High
cufflinks 6.008        
cufflinks 4.576        
cufflinks 6.322        
cufflinks 4.807        
cufflinks 3.797        
cufflinks 4.895        
cufflinks 2.079       Low
cufflinks 7.072       High
cufflinks 3.818        
cufflinks 4.253        
cufflinks 5.464        
cufflinks 8.869       High
cufflinks 3.122       Low
cufflinks 4.129        
cufflinks 4.942        
cufflinks 6.897        
cufflinks 5.003        
cufflinks 18.676        
cufflinks 17.996        
cufflinks 17.401        
cufflinks 24.653       High
cufflinks 19.211        
cufflinks 17.061        

0 Strain