Gene : Potri.008G177900 P. trichocarpa v3.0
Defline:  (1 of 1) 3.5.1.5 - Urease Genomic Order:  1779
Name:  ? Potri.008G177900 Secondary Identifier:  ? PAC:27039745
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5704 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G177900 0.5kb upstream 0.5kb upstream 9266 true Chr08: 12136034-12145299 Populus trichocarpa
Potri.008G177900 0.5kb upstream 0.5kb upstream 500 false Chr08: 12136034-12136533 Populus trichocarpa
Potri.008G177900 0.5kb downstream 0.5kb downstream 9266 true Chr08: 12136534-12145799 Populus trichocarpa
Potri.008G177900 0.5kb downstream 0.5kb downstream 500 false Chr08: 12145300-12145799 Populus trichocarpa
Potri.008G177900 1.0kb upstream 1.0kb upstream 9766 true Chr08: 12135534-12145299 Populus trichocarpa
Potri.008G177900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12135534-12136533 Populus trichocarpa
Potri.008G177900 1.0kb downstream 1.0kb downstream 9766 true Chr08: 12136534-12146299 Populus trichocarpa
Potri.008G177900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12145300-12146299 Populus trichocarpa
Potri.008G177900 2.0kb upstream 2.0kb upstream 10766 true Chr08: 12134534-12145299 Populus trichocarpa
Potri.008G177900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12134534-12136533 Populus trichocarpa
Potri.008G177900 2.0kb downstream 2.0kb downstream 10766 true Chr08: 12136534-12147299 Populus trichocarpa
Potri.008G177900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12145300-12147299 Populus trichocarpa
Potri.008G177900 5.0kb upstream 5.0kb upstream 13766 true Chr08: 12131534-12145299 Populus trichocarpa
Potri.008G177900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12131534-12136533 Populus trichocarpa
Potri.008G177900 5.0kb downstream 5.0kb downstream 13766 true Chr08: 12136534-12150299 Populus trichocarpa
Potri.008G177900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12145300-12150299 Populus trichocarpa
Potri.008G177900 10.0kb upstream 10.0kb upstream 18766 true Chr08: 12126534-12145299 Populus trichocarpa
Potri.008G177900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12126534-12136533 Populus trichocarpa
Potri.008G177900 10.0kb downstream 10.0kb downstream 18766 true Chr08: 12136534-12155299 Populus trichocarpa
Potri.008G177900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12145300-12155299 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.954        
cufflinks 3.274       High
cufflinks 2.522       High
cufflinks 0.939        
cufflinks 0.661        
cufflinks 0.748        
cufflinks 0.472       Low
cufflinks 1.528        
cufflinks 1.725        
cufflinks 1.094        
cufflinks 0.822        
cufflinks 0.798        
cufflinks 1.296        
cufflinks 0.409       Low
cufflinks 6.629       High
cufflinks 0.79        
cufflinks 0.46       Low
cufflinks 0.392       Low
cufflinks 3.145       High
cufflinks 0.949        
cufflinks 0.674        
cufflinks 2.67       High
cufflinks 0.391       Low
cufflinks 1.12        
cufflinks 23.307        
cufflinks 36.462     High High
cufflinks 44.367     High High
cufflinks 29.729     High  
cufflinks 30.213     High  
cufflinks 26.99     High  

0 Strain