Gene : Potri.012G036500 P. trichocarpa v3.0
Defline:  (1 of 1) K14849 - ribosomal RNA-processing protein 1 (RRP1) Genomic Order:  365
Name:  ? Potri.012G036500 Secondary Identifier:  ? PAC:27050163
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G036500 0.5kb upstream 0.5kb upstream 4341 true Chr12: 3259734-3264074 Populus trichocarpa
Potri.012G036500 0.5kb upstream 0.5kb upstream 500 false Chr12: 3259734-3260233 Populus trichocarpa
Potri.012G036500 0.5kb downstream 0.5kb downstream 4341 true Chr12: 3260234-3264574 Populus trichocarpa
Potri.012G036500 0.5kb downstream 0.5kb downstream 500 false Chr12: 3264075-3264574 Populus trichocarpa
Potri.012G036500 1.0kb upstream 1.0kb upstream 4841 true Chr12: 3259234-3264074 Populus trichocarpa
Potri.012G036500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3259234-3260233 Populus trichocarpa
Potri.012G036500 1.0kb downstream 1.0kb downstream 4841 true Chr12: 3260234-3265074 Populus trichocarpa
Potri.012G036500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3264075-3265074 Populus trichocarpa
Potri.012G036500 2.0kb upstream 2.0kb upstream 5841 true Chr12: 3258234-3264074 Populus trichocarpa
Potri.012G036500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3258234-3260233 Populus trichocarpa
Potri.012G036500 2.0kb downstream 2.0kb downstream 5841 true Chr12: 3260234-3266074 Populus trichocarpa
Potri.012G036500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3264075-3266074 Populus trichocarpa
Potri.012G036500 5.0kb upstream 5.0kb upstream 8841 true Chr12: 3255234-3264074 Populus trichocarpa
Potri.012G036500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3255234-3260233 Populus trichocarpa
Potri.012G036500 5.0kb downstream 5.0kb downstream 8841 true Chr12: 3260234-3269074 Populus trichocarpa
Potri.012G036500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3264075-3269074 Populus trichocarpa
Potri.012G036500 10.0kb upstream 10.0kb upstream 13841 true Chr12: 3250234-3264074 Populus trichocarpa
Potri.012G036500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3250234-3260233 Populus trichocarpa
Potri.012G036500 10.0kb downstream 10.0kb downstream 13841 true Chr12: 3260234-3274074 Populus trichocarpa
Potri.012G036500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3264075-3274074 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.885     High  
cufflinks 10.84     High  
cufflinks 8.08        
cufflinks 4.921       Low
cufflinks 6.14       Low
cufflinks 8.279        
cufflinks 5.963       Low
cufflinks 8.681        
cufflinks 10.366     High  
cufflinks 7.176        
cufflinks 9.844        
cufflinks 15.365     High High
cufflinks 7.815        
cufflinks 12.333     High High
cufflinks 7.949        
cufflinks 8.454        
cufflinks 9.941     High  
cufflinks 8.333        
cufflinks 5.515       Low
cufflinks 11.114     High  
cufflinks 6.94        
cufflinks 6.229       Low
cufflinks 10.831     High  
cufflinks 12.707     High High
cufflinks 19.266        
cufflinks 16.794        
cufflinks 18.425        
cufflinks 23.111        
cufflinks 25.515        
cufflinks 18.848        

0 Strain