Gene : Potri.009G156400 P. trichocarpa v3.0
Defline:  (1 of 1) K15376 - gephyrin (GPHN) Genomic Order:  1564
Name:  ? Potri.009G156400 Secondary Identifier:  ? PAC:26987086
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6823 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G156400 0.5kb upstream 0.5kb upstream 8466 true Chr09: 12157613-12166078 Populus trichocarpa
Potri.009G156400 0.5kb upstream 0.5kb upstream 500 false Chr09: 12165579-12166078 Populus trichocarpa
Potri.009G156400 0.5kb downstream 0.5kb downstream 8466 true Chr09: 12157113-12165578 Populus trichocarpa
Potri.009G156400 0.5kb downstream 0.5kb downstream 500 false Chr09: 12157113-12157612 Populus trichocarpa
Potri.009G156400 1.0kb upstream 1.0kb upstream 8966 true Chr09: 12157613-12166578 Populus trichocarpa
Potri.009G156400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12165579-12166578 Populus trichocarpa
Potri.009G156400 1.0kb downstream 1.0kb downstream 8966 true Chr09: 12156613-12165578 Populus trichocarpa
Potri.009G156400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12156613-12157612 Populus trichocarpa
Potri.009G156400 2.0kb upstream 2.0kb upstream 9966 true Chr09: 12157613-12167578 Populus trichocarpa
Potri.009G156400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12165579-12167578 Populus trichocarpa
Potri.009G156400 2.0kb downstream 2.0kb downstream 9966 true Chr09: 12155613-12165578 Populus trichocarpa
Potri.009G156400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12155613-12157612 Populus trichocarpa
Potri.009G156400 5.0kb upstream 5.0kb upstream 12966 true Chr09: 12157613-12170578 Populus trichocarpa
Potri.009G156400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12165579-12170578 Populus trichocarpa
Potri.009G156400 5.0kb downstream 5.0kb downstream 12966 true Chr09: 12152613-12165578 Populus trichocarpa
Potri.009G156400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12152613-12157612 Populus trichocarpa
Potri.009G156400 10.0kb upstream 10.0kb upstream 17966 true Chr09: 12157613-12175578 Populus trichocarpa
Potri.009G156400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12165579-12175578 Populus trichocarpa
Potri.009G156400 10.0kb downstream 10.0kb downstream 17966 true Chr09: 12147613-12165578 Populus trichocarpa
Potri.009G156400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12147613-12157612 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.933       Low
cufflinks 1.008        
cufflinks 2.144       High
cufflinks 1.455        
cufflinks 2.275       High
cufflinks 0.677       Low
cufflinks 2.188       High
cufflinks 1.285        
cufflinks 1.027        
cufflinks 0.688       Low
cufflinks 1.294        
cufflinks 1.421        
cufflinks 1.216        
cufflinks 1.937       High
cufflinks 0.92       Low
cufflinks 1.216        
cufflinks 2.137       High
cufflinks 1.795        
cufflinks 1.297        
cufflinks 1.986       High
cufflinks 1.125        
cufflinks 1.225        
cufflinks 1.964       High
cufflinks 1.316        
cufflinks 18.645        
cufflinks 19.51        
cufflinks 20.172        
cufflinks 19.012        
cufflinks 18.458        
cufflinks 19.476        

0 Strain