Gene : Potri.009G169700 P. trichocarpa v3.0
Defline:  (1 of 3) K01885 - glutamyl-tRNA synthetase (EARS, gltX) Genomic Order:  1697
Name:  ? Potri.009G169700 Secondary Identifier:  ? PAC:26986262
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5918 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5188 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G169700 0.5kb upstream 0.5kb upstream 5651 true Chr09: 12856180-12861830 Populus trichocarpa
Potri.009G169700 0.5kb upstream 0.5kb upstream 500 false Chr09: 12856180-12856679 Populus trichocarpa
Potri.009G169700 0.5kb downstream 0.5kb downstream 5651 true Chr09: 12856680-12862330 Populus trichocarpa
Potri.009G169700 0.5kb downstream 0.5kb downstream 500 false Chr09: 12861831-12862330 Populus trichocarpa
Potri.009G169700 1.0kb upstream 1.0kb upstream 6151 true Chr09: 12855680-12861830 Populus trichocarpa
Potri.009G169700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12855680-12856679 Populus trichocarpa
Potri.009G169700 1.0kb downstream 1.0kb downstream 6151 true Chr09: 12856680-12862830 Populus trichocarpa
Potri.009G169700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12861831-12862830 Populus trichocarpa
Potri.009G169700 2.0kb upstream 2.0kb upstream 7151 true Chr09: 12854680-12861830 Populus trichocarpa
Potri.009G169700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12854680-12856679 Populus trichocarpa
Potri.009G169700 2.0kb downstream 2.0kb downstream 7151 true Chr09: 12856680-12863830 Populus trichocarpa
Potri.009G169700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12861831-12863830 Populus trichocarpa
Potri.009G169700 5.0kb upstream 5.0kb upstream 10151 true Chr09: 12851680-12861830 Populus trichocarpa
Potri.009G169700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12851680-12856679 Populus trichocarpa
Potri.009G169700 5.0kb downstream 5.0kb downstream 10151 true Chr09: 12856680-12866830 Populus trichocarpa
Potri.009G169700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12861831-12866830 Populus trichocarpa
Potri.009G169700 10.0kb upstream 10.0kb upstream 15151 true Chr09: 12846680-12861830 Populus trichocarpa
Potri.009G169700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12846680-12856679 Populus trichocarpa
Potri.009G169700 10.0kb downstream 10.0kb downstream 15151 true Chr09: 12856680-12871830 Populus trichocarpa
Potri.009G169700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12861831-12871830 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.383        
cufflinks 5.866        
cufflinks 4.363        
cufflinks 5.451        
cufflinks 4.411        
cufflinks 2.382       Low
cufflinks 5.276        
cufflinks 4.112        
cufflinks 5.533        
cufflinks 3.605        
cufflinks 4.707        
cufflinks 5.362        
cufflinks 4.914        
cufflinks 3.105       Low
cufflinks 5.186        
cufflinks 10.193     High High
cufflinks 3.326        
cufflinks 6.14        
cufflinks 8.707       High
cufflinks 2.464       Low
cufflinks 3.348        
cufflinks 6.395        
cufflinks 4.038        
cufflinks 6.334        
cufflinks 30.121     High  
cufflinks 40.676     High High
cufflinks 38.677     High High
cufflinks 34.623     High  
cufflinks 31.048     High  
cufflinks 33.362     High  

0 Strain