Gene : Potri.009G119200 P. trichocarpa v3.0
Defline:  (1 of 1) KOG0673 - Thymidylate synthase Genomic Order:  1192
Name:  ? Potri.009G119200 Secondary Identifier:  ? PAC:26986512
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-3841 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7210 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7199 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6612 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6614 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7211 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7184 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7200 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G119200 0.5kb upstream 0.5kb upstream 6225 true Chr09: 9992179-9998403 Populus trichocarpa
Potri.009G119200 0.5kb upstream 0.5kb upstream 500 false Chr09: 9997904-9998403 Populus trichocarpa
Potri.009G119200 0.5kb downstream 0.5kb downstream 6225 true Chr09: 9991679-9997903 Populus trichocarpa
Potri.009G119200 0.5kb downstream 0.5kb downstream 500 false Chr09: 9991679-9992178 Populus trichocarpa
Potri.009G119200 1.0kb upstream 1.0kb upstream 6725 true Chr09: 9992179-9998903 Populus trichocarpa
Potri.009G119200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9997904-9998903 Populus trichocarpa
Potri.009G119200 1.0kb downstream 1.0kb downstream 6725 true Chr09: 9991179-9997903 Populus trichocarpa
Potri.009G119200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9991179-9992178 Populus trichocarpa
Potri.009G119200 2.0kb upstream 2.0kb upstream 7725 true Chr09: 9992179-9999903 Populus trichocarpa
Potri.009G119200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9997904-9999903 Populus trichocarpa
Potri.009G119200 2.0kb downstream 2.0kb downstream 7725 true Chr09: 9990179-9997903 Populus trichocarpa
Potri.009G119200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9990179-9992178 Populus trichocarpa
Potri.009G119200 5.0kb upstream 5.0kb upstream 10725 true Chr09: 9992179-10002903 Populus trichocarpa
Potri.009G119200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9997904-10002903 Populus trichocarpa
Potri.009G119200 5.0kb downstream 5.0kb downstream 10725 true Chr09: 9987179-9997903 Populus trichocarpa
Potri.009G119200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9987179-9992178 Populus trichocarpa
Potri.009G119200 10.0kb upstream 10.0kb upstream 15725 true Chr09: 9992179-10007903 Populus trichocarpa
Potri.009G119200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9997904-10007903 Populus trichocarpa
Potri.009G119200 10.0kb downstream 10.0kb downstream 15725 true Chr09: 9982179-9997903 Populus trichocarpa
Potri.009G119200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9982179-9992178 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.336       Low
cufflinks 1.144        
cufflinks 2.312        
cufflinks 1.34        
cufflinks 1.378        
cufflinks 1.338        
cufflinks 0.166       Low
cufflinks 1.994        
cufflinks 1.838        
cufflinks 0.319       Low
cufflinks 1.123        
cufflinks 0.31       Low
cufflinks 1.112        
cufflinks 0.539        
cufflinks 2.868       High
cufflinks 2.275        
cufflinks 1.112        
cufflinks 1.256        
cufflinks 2.158        
cufflinks 0.372       Low
cufflinks 2.533       High
cufflinks 1.565        
cufflinks 2.071        
cufflinks 0.313       Low
cufflinks 6.701       Low
cufflinks 45.614     High High
cufflinks 55.13     High High
cufflinks 18.502        
cufflinks 16.844        
cufflinks 22.24        

0 Strain