Gene : Potri.015G069700 P. trichocarpa v3.0
Defline:  (1 of 2) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) Genomic Order:  697
Name:  ? Potri.015G069700 Secondary Identifier:  ? PAC:27017136
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G069700 0.5kb upstream 0.5kb upstream 6571 true Chr15: 9434626-9441196 Populus trichocarpa
Potri.015G069700 0.5kb upstream 0.5kb upstream 500 false Chr15: 9434626-9435125 Populus trichocarpa
Potri.015G069700 0.5kb downstream 0.5kb downstream 6571 true Chr15: 9435126-9441696 Populus trichocarpa
Potri.015G069700 0.5kb downstream 0.5kb downstream 500 false Chr15: 9441197-9441696 Populus trichocarpa
Potri.015G069700 1.0kb upstream 1.0kb upstream 7071 true Chr15: 9434126-9441196 Populus trichocarpa
Potri.015G069700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9434126-9435125 Populus trichocarpa
Potri.015G069700 1.0kb downstream 1.0kb downstream 7071 true Chr15: 9435126-9442196 Populus trichocarpa
Potri.015G069700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9441197-9442196 Populus trichocarpa
Potri.015G069700 2.0kb upstream 2.0kb upstream 8071 true Chr15: 9433126-9441196 Populus trichocarpa
Potri.015G069700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9433126-9435125 Populus trichocarpa
Potri.015G069700 2.0kb downstream 2.0kb downstream 8071 true Chr15: 9435126-9443196 Populus trichocarpa
Potri.015G069700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 9441197-9443196 Populus trichocarpa
Potri.015G069700 5.0kb upstream 5.0kb upstream 11071 true Chr15: 9430126-9441196 Populus trichocarpa
Potri.015G069700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9430126-9435125 Populus trichocarpa
Potri.015G069700 5.0kb downstream 5.0kb downstream 11071 true Chr15: 9435126-9446196 Populus trichocarpa
Potri.015G069700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 9441197-9446196 Populus trichocarpa
Potri.015G069700 10.0kb upstream 10.0kb upstream 16071 true Chr15: 9425126-9441196 Populus trichocarpa
Potri.015G069700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9425126-9435125 Populus trichocarpa
Potri.015G069700 10.0kb downstream 10.0kb downstream 16071 true Chr15: 9435126-9451196 Populus trichocarpa
Potri.015G069700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 9441197-9451196 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.268     High  
cufflinks 20.69     High  
cufflinks 39.613     High High
cufflinks 19.805     High  
cufflinks 25.678     High  
cufflinks 13.977     High Low
cufflinks 17.244     High Low
cufflinks 34.004     High  
cufflinks 17.823     High Low
cufflinks 24.405     High  
cufflinks 32.875     High  
cufflinks 24.189     High  
cufflinks 30.385     High  
cufflinks 35.555     High High
cufflinks 13.332     High Low
cufflinks 16.429     High Low
cufflinks 20.958     High  
cufflinks 31.775     High  
cufflinks 17.564     High Low
cufflinks 42.888     High High
cufflinks 22.94     High  
cufflinks 36.996     High High
cufflinks 28.144     High  
cufflinks 32.966     High  
cufflinks 14.649        
cufflinks 15.545        
cufflinks 20.385        
cufflinks 17.668        
cufflinks 23.48        
cufflinks 19.049        

0 Strain