Gene : Potri.010G115800 P. trichocarpa v3.0
Defline:  (1 of 1) KOG3104 - Mod5 protein sorting/negative effector of RNA Pol III synthesis Genomic Order:  1158
Name:  ? Potri.010G115800 Secondary Identifier:  ? PAC:26982372
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G115800 0.5kb upstream 0.5kb upstream 3597 true Chr10: 13379878-13383474 Populus trichocarpa
Potri.010G115800 0.5kb upstream 0.5kb upstream 500 false Chr10: 13379878-13380377 Populus trichocarpa
Potri.010G115800 0.5kb downstream 0.5kb downstream 3597 true Chr10: 13380378-13383974 Populus trichocarpa
Potri.010G115800 0.5kb downstream 0.5kb downstream 500 false Chr10: 13383475-13383974 Populus trichocarpa
Potri.010G115800 1.0kb upstream 1.0kb upstream 4097 true Chr10: 13379378-13383474 Populus trichocarpa
Potri.010G115800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13379378-13380377 Populus trichocarpa
Potri.010G115800 1.0kb downstream 1.0kb downstream 4097 true Chr10: 13380378-13384474 Populus trichocarpa
Potri.010G115800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13383475-13384474 Populus trichocarpa
Potri.010G115800 2.0kb upstream 2.0kb upstream 5097 true Chr10: 13378378-13383474 Populus trichocarpa
Potri.010G115800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13378378-13380377 Populus trichocarpa
Potri.010G115800 2.0kb downstream 2.0kb downstream 5097 true Chr10: 13380378-13385474 Populus trichocarpa
Potri.010G115800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13383475-13385474 Populus trichocarpa
Potri.010G115800 5.0kb upstream 5.0kb upstream 8097 true Chr10: 13375378-13383474 Populus trichocarpa
Potri.010G115800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13375378-13380377 Populus trichocarpa
Potri.010G115800 5.0kb downstream 5.0kb downstream 8097 true Chr10: 13380378-13388474 Populus trichocarpa
Potri.010G115800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13383475-13388474 Populus trichocarpa
Potri.010G115800 10.0kb upstream 10.0kb upstream 13097 true Chr10: 13370378-13383474 Populus trichocarpa
Potri.010G115800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13370378-13380377 Populus trichocarpa
Potri.010G115800 10.0kb downstream 10.0kb downstream 13097 true Chr10: 13380378-13393474 Populus trichocarpa
Potri.010G115800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13383475-13393474 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.588        
cufflinks 2.15        
cufflinks 2.052        
cufflinks 3.285        
cufflinks 2.8        
cufflinks 2.371        
cufflinks 3.337        
cufflinks 3.09        
cufflinks 1.688       Low
cufflinks 2.199        
cufflinks 1.969       Low
cufflinks 3.114        
cufflinks 2.435        
cufflinks 2.106        
cufflinks 1.959       Low
cufflinks 1.915       Low
cufflinks 3.193        
cufflinks 2.317        
cufflinks 6.43       High
cufflinks 4.068       High
cufflinks 3.345        
cufflinks 2.957        
cufflinks 2.863        
cufflinks 2.621        
cufflinks 24.535       High
cufflinks 15.583        
cufflinks 17.741        
cufflinks 19.706        
cufflinks 18.732        
cufflinks 16.875        

0 Strain