Gene : Potri.009G167000 P. trichocarpa v3.0
Defline:  (1 of 3) K12385 - Niemann-Pick C1 protein (NPC1) Genomic Order:  1670
Name:  ? Potri.009G167000 Secondary Identifier:  ? PAC:26986795
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G167000 0.5kb upstream 0.5kb upstream 14212 true Chr09: 12722692-12736903 Populus trichocarpa
Potri.009G167000 0.5kb upstream 0.5kb upstream 500 false Chr09: 12736404-12736903 Populus trichocarpa
Potri.009G167000 0.5kb downstream 0.5kb downstream 14212 true Chr09: 12722192-12736403 Populus trichocarpa
Potri.009G167000 0.5kb downstream 0.5kb downstream 500 false Chr09: 12722192-12722691 Populus trichocarpa
Potri.009G167000 1.0kb upstream 1.0kb upstream 14712 true Chr09: 12722692-12737403 Populus trichocarpa
Potri.009G167000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12736404-12737403 Populus trichocarpa
Potri.009G167000 1.0kb downstream 1.0kb downstream 14712 true Chr09: 12721692-12736403 Populus trichocarpa
Potri.009G167000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12721692-12722691 Populus trichocarpa
Potri.009G167000 2.0kb upstream 2.0kb upstream 15712 true Chr09: 12722692-12738403 Populus trichocarpa
Potri.009G167000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12736404-12738403 Populus trichocarpa
Potri.009G167000 2.0kb downstream 2.0kb downstream 15712 true Chr09: 12720692-12736403 Populus trichocarpa
Potri.009G167000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12720692-12722691 Populus trichocarpa
Potri.009G167000 5.0kb upstream 5.0kb upstream 18712 true Chr09: 12722692-12741403 Populus trichocarpa
Potri.009G167000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12736404-12741403 Populus trichocarpa
Potri.009G167000 5.0kb downstream 5.0kb downstream 18712 true Chr09: 12717692-12736403 Populus trichocarpa
Potri.009G167000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12717692-12722691 Populus trichocarpa
Potri.009G167000 10.0kb upstream 10.0kb upstream 23712 true Chr09: 12722692-12746403 Populus trichocarpa
Potri.009G167000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12736404-12746403 Populus trichocarpa
Potri.009G167000 10.0kb downstream 10.0kb downstream 23712 true Chr09: 12712692-12736403 Populus trichocarpa
Potri.009G167000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12712692-12722691 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.192        
cufflinks 7.375       High
cufflinks 3.912       Low
cufflinks 3.522       Low
cufflinks 3.421       Low
cufflinks 7.295       High
cufflinks 7.334       High
cufflinks 6.568        
cufflinks 4.122        
cufflinks 6.408        
cufflinks 6.8        
cufflinks 5.993        
cufflinks 4.515        
cufflinks 3.981        
cufflinks 7.406       High
cufflinks 3.891       Low
cufflinks 8.174       High
cufflinks 4.508        
cufflinks 3.541       Low
cufflinks 4.563        
cufflinks 5.778        
cufflinks 6.74        
cufflinks 4.478        
cufflinks 6.769        
cufflinks 23.51        
cufflinks 30.956     High  
cufflinks 31.095     High  
cufflinks 30.401     High  
cufflinks 27.073        
cufflinks 31.032     High  

0 Strain