Gene : Potri.010G067600 P. trichocarpa v3.0
Defline:  (1 of 4) K00574 - cyclopropane-fatty-acyl-phospholipid synthase (E2.1.1.79, cfa) Genomic Order:  676
Name:  ? Potri.010G067600 Secondary Identifier:  ? PAC:26978323
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-4942 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G067600 0.5kb upstream 0.5kb upstream 3431 true Chr10: 9440237-9443667 Populus trichocarpa
Potri.010G067600 0.5kb upstream 0.5kb upstream 500 false Chr10: 9443168-9443667 Populus trichocarpa
Potri.010G067600 0.5kb downstream 0.5kb downstream 3431 true Chr10: 9439737-9443167 Populus trichocarpa
Potri.010G067600 0.5kb downstream 0.5kb downstream 500 false Chr10: 9439737-9440236 Populus trichocarpa
Potri.010G067600 1.0kb upstream 1.0kb upstream 3931 true Chr10: 9440237-9444167 Populus trichocarpa
Potri.010G067600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9443168-9444167 Populus trichocarpa
Potri.010G067600 1.0kb downstream 1.0kb downstream 3931 true Chr10: 9439237-9443167 Populus trichocarpa
Potri.010G067600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9439237-9440236 Populus trichocarpa
Potri.010G067600 2.0kb upstream 2.0kb upstream 4931 true Chr10: 9440237-9445167 Populus trichocarpa
Potri.010G067600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9443168-9445167 Populus trichocarpa
Potri.010G067600 2.0kb downstream 2.0kb downstream 4931 true Chr10: 9438237-9443167 Populus trichocarpa
Potri.010G067600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9438237-9440236 Populus trichocarpa
Potri.010G067600 5.0kb upstream 5.0kb upstream 7931 true Chr10: 9440237-9448167 Populus trichocarpa
Potri.010G067600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9443168-9448167 Populus trichocarpa
Potri.010G067600 5.0kb downstream 5.0kb downstream 7931 true Chr10: 9435237-9443167 Populus trichocarpa
Potri.010G067600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9435237-9440236 Populus trichocarpa
Potri.010G067600 10.0kb upstream 10.0kb upstream 12931 true Chr10: 9440237-9453167 Populus trichocarpa
Potri.010G067600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9443168-9453167 Populus trichocarpa
Potri.010G067600 10.0kb downstream 10.0kb downstream 12931 true Chr10: 9430237-9443167 Populus trichocarpa
Potri.010G067600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9430237-9440236 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.219        
cufflinks 0.048     Low  
cufflinks 0.45       High
cufflinks 0.041     Low Low
cufflinks 0.064     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.439       High
cufflinks 0.065     Low  
cufflinks 0.056     Low  
cufflinks 0.446       High
cufflinks 0.074     Low  
cufflinks 0.173        
cufflinks 0.128     Low  
cufflinks 0.058     Low  
cufflinks 0.299        
cufflinks 0.046     Low Low
cufflinks 0.17        
cufflinks 0.194        
cufflinks 4.593       High
cufflinks 0.054     Low  
cufflinks 0.416        
cufflinks 0.072     Low  
cufflinks 0.082     Low  
cufflinks 0.114     Low  
cufflinks 0.557        
cufflinks 0.264     Low  
cufflinks 0.407     Low  
cufflinks 0.4     Low  
cufflinks 0.446        
cufflinks 0.359        

0 Strain