Gene : Potri.010G178200 P. trichocarpa v3.0
Defline:  (1 of 3) K01653 - acetolactate synthase I/III small subunit (E2.2.1.6S, ilvH, ilvN) Genomic Order:  1782
Name:  ? Potri.010G178200 Secondary Identifier:  ? PAC:26978899
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa BRANCHED-CHAIN-AA-SYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa VALSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ILEUSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G178200 0.5kb upstream 0.5kb upstream 8462 true Chr10: 17739511-17747972 Populus trichocarpa
Potri.010G178200 0.5kb upstream 0.5kb upstream 500 false Chr10: 17747473-17747972 Populus trichocarpa
Potri.010G178200 0.5kb downstream 0.5kb downstream 8462 true Chr10: 17739011-17747472 Populus trichocarpa
Potri.010G178200 0.5kb downstream 0.5kb downstream 500 false Chr10: 17739011-17739510 Populus trichocarpa
Potri.010G178200 1.0kb upstream 1.0kb upstream 8962 true Chr10: 17739511-17748472 Populus trichocarpa
Potri.010G178200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 17747473-17748472 Populus trichocarpa
Potri.010G178200 1.0kb downstream 1.0kb downstream 8962 true Chr10: 17738511-17747472 Populus trichocarpa
Potri.010G178200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 17738511-17739510 Populus trichocarpa
Potri.010G178200 2.0kb upstream 2.0kb upstream 9962 true Chr10: 17739511-17749472 Populus trichocarpa
Potri.010G178200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 17747473-17749472 Populus trichocarpa
Potri.010G178200 2.0kb downstream 2.0kb downstream 9962 true Chr10: 17737511-17747472 Populus trichocarpa
Potri.010G178200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 17737511-17739510 Populus trichocarpa
Potri.010G178200 5.0kb upstream 5.0kb upstream 12962 true Chr10: 17739511-17752472 Populus trichocarpa
Potri.010G178200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 17747473-17752472 Populus trichocarpa
Potri.010G178200 5.0kb downstream 5.0kb downstream 12962 true Chr10: 17734511-17747472 Populus trichocarpa
Potri.010G178200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 17734511-17739510 Populus trichocarpa
Potri.010G178200 10.0kb upstream 10.0kb upstream 17962 true Chr10: 17739511-17757472 Populus trichocarpa
Potri.010G178200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 17747473-17757472 Populus trichocarpa
Potri.010G178200 10.0kb downstream 10.0kb downstream 17962 true Chr10: 17729511-17747472 Populus trichocarpa
Potri.010G178200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 17729511-17739510 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.16        
cufflinks 0.056     Low Low
cufflinks 2.738       High
cufflinks 0.816        
cufflinks 0.466        
cufflinks 2.107       High
cufflinks 0.497        
cufflinks 1.564        
cufflinks 0.718        
cufflinks 2.749       High
cufflinks 1.921       High
cufflinks 0.392        
cufflinks 0.722        
cufflinks 0.184        
cufflinks 0.071     Low Low
cufflinks 0.226        
cufflinks 0.434        
cufflinks 0.183        
cufflinks 0.965        
cufflinks 0.093     Low Low
cufflinks 0.061     Low Low
cufflinks 0.486        
cufflinks 2.008       High
cufflinks 0.881        
cufflinks 1.403        
cufflinks 1.36        
cufflinks 1.592        
cufflinks 2.671       High
cufflinks 2.521        
cufflinks 1.497        

0 Strain